RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 P2RY13Q9BPV8 354 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 MAPKAP1Q9BPZ7 522 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 C11orf54Q9H0W9 315 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-201ENST00000309017 COMMD3Q9UBI1 195 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 SEC14L4Q9UDX3 406 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 SATB2Q9UPW6 733 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 MAPRE3Q9UPY8 281 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 CLCA3PQ9Y6N3 262 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 A0A1W2PQ72 361 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 H3BNC9 293 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 SAP18O00422 153 aaKnown RBP10.7□□□□□ -0.7
PTPN7-201ENST00000309017 PRMT3O60678 531 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 STC2O76061 302 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 PDE9AO76083 593 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 CRYZL1O95825 349 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 C6orf47O95873 294 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 SEMG1P04279 462 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 IFNW1P05000 195 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 C8GP07360 202 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 JUPP14923 745 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 TNNI3P19429 210 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 ASMTP46597 345 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 RAB25P57735 213 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 CDK6Q00534 326 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 C22orf42Q6IC83 251 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 KLHL17Q6TDP4 642 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 PRSS55Q6UWB4 352 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-201ENST00000309017 FAM46DQ8NEK8 389 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 GEMIN6Q8WXD5 167 aaKnown RBP10.7□□□□□ -0.7
PTPN7-201ENST00000309017 MCCC1Q96RQ3 725 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-201ENST00000309017 RAD9AQ99638 391 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 BRD9Q9H8M2 597 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 GPBP1L1Q9HC44 474 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-201ENST00000309017 XIRP2A4UGR9 3374 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 FAM240BA0A1B0GVZ2 78 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 SYN3O14994 580 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 SMAD6O43541 496 aaKnown RBP10.7□□□□□ -0.7
PTPN7-201ENST00000309017 APOL3O95236 402 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 RPL17P18621 184 aaKnown RBP10.7□□□□□ -0.7
PTPN7-201ENST00000309017 CHMP24386 653 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 IFNA8P32881 189 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 GSTM5P46439 218 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 CCL23P55773 120 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 NKX3-2P78367 333 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 NCF4Q15080 339 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 TAF1CQ15572 869 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-201ENST00000309017 SYTL3Q4VX76 610 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 CEP78Q5JTW2 689 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 DDI2Q5TDH0 399 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 TRIM40Q6P9F5 258 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 ZNF852Q6ZMS4 543 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 VWA5B2Q8N398 1253 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 GPR26Q8NDV2 337 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 OR8J2Q8NGG1 315 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 SNAPC3Q92966 411 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 TRIM45Q9H8W5 580 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-201ENST00000309017 RNF121Q9H920 327 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 ZDHHC3Q9NYG2 299 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 MOSPD1Q9UJG1 213 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 C12orf71A8MTZ7 269 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 ZNF197O14709 1029 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 HNMTP50135 292 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 GALK2Q01415 458 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 PLD1Q13393 1074 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 UAP1L1Q3KQV9 507 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 ATP13A5Q4VNC0 1218 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 METTL2BQ6P1Q9 378 aaKnown RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 RFPL4BQ6ZWI9 263 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 BCDIN3DQ7Z5W3 292 aaKnown RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 PGBD3Q8N328 593 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 TCEANCQ8N8B7 351 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 OPALINQ96PE5 141 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 PIP5K1AQ99755 562 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 SPIN1Q9Y657 262 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 C2orf78A6NCI8 922 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 E7EQ34 232 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 CBSLP0DN79 551 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 CBSP35520 551 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 SMAD3P84022 425 aaKnown RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 DOC2AQ14183 400 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 CLLU1OSQ5K130 101 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 LCN1P1Q5VSP4 162 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 MLIPQ5VWP3 458 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 C9orf131Q5VYM1 1079 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 FRMPD2BQ6IN97 320 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 ADNP2Q6IQ32 1131 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 CXorf57Q6NSI4 855 aaKnown RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 DEF8Q6ZN54 512 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 VRK3Q8IV63 474 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 PEX5LQ8IYB4 626 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 OMA1Q96E52 524 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 TMEM80Q96HE8 168 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 SLC12A9Q9BXP2 914 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 TMEM121BQ9BXQ6 578 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 NMNAT1Q9HAN9 279 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 TVP23BQ9NYZ1 205 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 STUB1Q9UNE7 303 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 ANGPT4Q9Y264 503 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 HSPB11Q9Y547 144 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 SH3D21A4FU49 640 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms