RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 SHFQ7M4L6 423 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 ZNF551Q7Z340 670 aaPredicted RBP13.5□□□□□ -0.25
SDC2-201ENST00000302190 CADM3Q8N126 398 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 CELF5Q8N6W0 485 aaKnown RBP13.5□□□□□ -0.25
SDC2-201ENST00000302190 OMA1Q96E52 524 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 FERD3LQ96RJ6 166 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 NTN4Q9HB63 628 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 HCFC1R1Q9NWW0 138 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 RIMKLBQ9ULI2 386 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 MYO15AQ9UKN7 3530 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 TTC34A8MYJ7 566 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 TSPAN12O95859 305 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 DAPP51397 102 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 PHC1P78364 1004 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 TEAD4Q15561 434 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 ADPRMQ3LIE5 342 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 KIAA1161Q6NSJ0 714 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 CCBE1Q6UXH8 406 aaPredicted RBP13.5□□□□□ -0.25
SDC2-201ENST00000302190 SPATC1Q76KD6 591 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 FAM124AQ86V42 546 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 YAF2Q8IY57 180 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 GOLM1Q8NBJ4 401 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 BPIFB1Q8TDL5 484 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 SLC9A6Q92581 669 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 PTGFRNQ9P2B2 879 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 CRNNQ9UBG3 495 aaPredicted RBP13.5□□□□□ -0.25
SDC2-201ENST00000302190 LHX3Q9UBR4 397 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 ENPP5Q9UJA9 477 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 CORO2BQ9UQ03 480 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 IFT52Q9Y366 437 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 SEC16AO15027 2179 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 FAM92AA1XBS5 289 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 ZSCAN5BA6NJL1 495 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 ISM1B1AKI9 464 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 H7BY64 318 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 LEFTY2O00292 366 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 CCRL2O00421 344 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 OR2B6P58173 313 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 TUBA1BP68363 451 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 NKX3-2P78367 333 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 OLR1P78380 273 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 DSC1Q08554 894 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 TUBA1AQ71U36 451 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 MTSS1LQ765P7 747 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 CHPFQ8IZ52 775 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 DPP10Q8N608 796 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 IQCF1Q8N6M8 205 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 UXS1Q8NBZ7 420 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 OR7G1Q8NGA0 311 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 TRIM43Q96BQ3 446 aaPredicted RBP13.5□□□□□ -0.25
SDC2-201ENST00000302190 PRAP1Q96NZ9 151 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 MACROD1Q9BQ69 325 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 NKIRAS2Q9NYR9 191 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 GULP1Q9UBP9 304 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 ZNF282Q9UDV7 671 aaPredicted RBP13.5□□□□□ -0.25
SDC2-201ENST00000302190 GPSM3Q9Y4H4 160 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 IGLV3-10A0A075B6K4 115 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 ARNTLO00327 626 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 POP7O75817 140 aaKnown RBP13.49□□□□□ -0.25
SDC2-201ENST00000302190 ADH1AP07327 375 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 ANXA8P13928 327 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 SLC15A1P46059 708 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 AVPR1BP47901 424 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 HNMTP50135 292 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 CTSCP53634 463 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 TAS2R41P59536 307 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 CSNK2BP67870 215 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 NTHL1P78549 312 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 DPY19L1Q2PZI1 675 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.49□□□□□ -0.25
SDC2-201ENST00000302190 OLIG3Q7RTU3 272 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 C16orf62Q7Z3J2 963 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 LILRB4Q8NHJ6 448 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 TRNT1Q96Q11 434 aaKnown RBP13.49□□□□□ -0.25
SDC2-201ENST00000302190 MGLLQ99685 303 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 ZNF221Q9UK13 617 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 TRANK1O15050 2925 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 TCRBV5S2A0A599 114 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 IL3P08700 152 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 SLC35G4P0C7Q5 338 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 SRCP12931 536 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 AP1S2P56377 157 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 AQP6Q13520 282 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 CRB2Q5IJ48 1285 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 USP43Q70EL4 1123 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 PTRH1Q86Y79 214 aaKnown RBP13.49□□□□□ -0.25
SDC2-201ENST00000302190 FAM20CQ8IXL6 584 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 PGBD3Q8N328 593 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 C10orf53Q8N6V4 93 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 SLC38A4Q969I6 547 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 CLSTN3Q9BQT9 956 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 TMEM106CQ9BVX2 250 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 TTTY10Q9BZA0 68 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 IGFLR1Q9H665 355 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 CLMPQ9H6B4 373 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 KCNK12Q9HB15 430 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 ENTPD4Q9Y227 616 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 MED16Q9Y2X0 877 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 USP34Q70CQ2 3546 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 GABRR3A8MPY1 467 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms