RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SLC30A4O14863 429 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 PCDH17O14917 1159 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 NDUFB5O43674 189 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 NOS1APO75052 506 aaPredicted RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 WBP4O75554 376 aaKnown RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 STX4Q12846 297 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 MORN1Q5T089 497 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 CDK20Q8IZL9 346 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 SCAIQ8N9R8 606 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 FLCNQ8NFG4 579 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 IPCEF1Q8WWN9 437 aaPredicted RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 DOHHQ9BU89 302 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 SLC29A3Q9BZD2 475 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 CHIAQ9BZP6 476 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 CARS2Q9HA77 564 aaKnown RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 TBCCD1Q9NVR7 557 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 KNTC1P50748 2209 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 DOCK3Q8IZD9 2030 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 POLR2AP24928 1970 aaKnown RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 GABRR3A8MPY1 467 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 FGBP02675 491 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 HPGDP15428 266 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 GJA8P48165 433 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 CLCN7P51798 805 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 MAP4K2Q12851 820 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 DPY19L1Q2PZI1 675 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 TYSND1Q2T9J0 566 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 ATAT1Q5SQI0 421 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 CPZQ66K79 652 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 GALNT12Q8IXK2 581 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 CCDC116Q8IYX3 515 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 GPR150Q8NGU9 434 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 DNASE1L2Q92874 299 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 C12orf66Q96MD2 445 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 TEFMQ96QE5 360 aaKnown RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 TUBA1CQ9BQE3 449 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 ABCD2Q9UBJ2 740 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 CFL2Q9Y281 166 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 HCN4Q9Y3Q4 1203 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 ZNF860A6NHJ4 632 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 SMAD9O15198 467 aaKnown RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 PDPK1O15530 556 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 NUDT14O95848 222 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 H1F0P07305 194 aaKnown RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 OR12D1P0DN82 309 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 ANXA11P50995 505 aaKnown RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 RAB14P61106 215 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 TBPL1P62380 186 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 GRIK2Q13002 908 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 AQP6Q13520 282 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 HEPACAMQ14CZ8 416 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 MAD2L1BPQ15013 274 aaPredicted RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 TEAD2Q15562 447 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 GPR68Q15743 365 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 XKR4Q5GH76 650 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 CDC73Q6P1J9 531 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 ARL9Q6T311 187 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 BHLHA9Q7RTU4 235 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 MRPL10Q7Z7H8 261 aaKnown RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 OR7G3Q8NG95 312 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 GATAD2BQ8WXI9 593 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 TRPS1Q9UHF7 1281 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 TRIP12Q14669 1992 aaPredicted RBP12.78□□□□□ -0.36
CASC4-201ENST00000299957 LEFTY2O00292 366 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 TAPBPO15533 448 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 ERI3O43414 337 aaKnown RBP12.78□□□□□ -0.36
CASC4-201ENST00000299957 AP1S2P56377 157 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 GINS1Q14691 196 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 COQ5Q5HYK3 327 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 MANEALQ5VSG8 457 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 Q6ZNX1 250 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 TFGQ92734 400 aaPredicted RBP12.78□□□□□ -0.36
CASC4-201ENST00000299957 TMEM246Q9BRR3 403 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 SIAEQ9HAT2 523 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 FAM120CQ9NX05 1096 aaKnown RBP12.78□□□□□ -0.36
CASC4-201ENST00000299957 DEC1Q9P2X7 70 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 POFUT2Q9Y2G5 429 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 PCDHB11Q9Y5F2 797 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 TBC1D3DA0A087WVF3 549 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 TBC1D3IA0A087WXS9 549 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 TBC1D3EA0A087X179 549 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 TBC1D3KA0A087X1G2 549 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 C2orf92A0A1B0GVN3 265 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 ASPDHA6ND91 283 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 TBC1D3FA6NER0 549 aaPredicted RBP12.78□□□□□ -0.36
CASC4-201ENST00000299957 TBC1D3LB9A6J9 549 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 BTN3A3O00478 584 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 TBC1D3HP0C7X1 549 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 TBC1D3GQ6DHY5 549 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 TBC1D3CQ6IPX1 549 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 MZT2BQ6NZ67 158 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 SHQ1Q6PI26 577 aaKnown RBP12.78□□□□□ -0.36
CASC4-201ENST00000299957 COMMD6Q7Z4G1 85 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 MARCH9Q86YJ5 346 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 TBC1D3Q8IZP1 549 aaPredicted RBP12.78□□□□□ -0.36
CASC4-201ENST00000299957 KLHL6Q8WZ60 621 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 NEIL2Q969S2 332 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 UBE2E3Q969T4 207 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 IGSF21Q96ID5 467 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 RDH12Q96NR8 316 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms