RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 ZNF384Q8TF68 577 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 NSUN3Q9H649 340 aaKnown RBP11.16□□□□□ -0.62
LAMA4-201ENST00000230538 TMEM5Q9Y2B1 443 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 LEFTY2O00292 366 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 PTNP21246 168 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 F8A1P23610 371 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 CCND3P30281 292 aaPredicted RBP11.16□□□□□ -0.62
LAMA4-201ENST00000230538 PREPP48147 710 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 PTPRCAPQ14761 206 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 TGFBIQ15582 683 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 CDKL4Q5MAI5 379 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 KCTD9Q7L273 389 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 OR5T2Q8NGG2 359 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 SNED1Q8TER0 1413 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 WDR77Q9BQA1 342 aaPredicted RBP11.16□□□□□ -0.62
LAMA4-201ENST00000230538 ZNF717Q9BY31 904 aaPredicted RBP11.16□□□□□ -0.62
LAMA4-201ENST00000230538 GIMAP2Q9UG22 337 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 EXOSC1Q9Y3B2 195 aaKnown RBP11.16□□□□□ -0.62
LAMA4-201ENST00000230538 PRSS51A0A1B0GVH4 220 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 GRID2O43424 1007 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 HEXBP07686 556 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 ACADVLP49748 655 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 MLLT10P55197 1068 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 MAB21L1Q13394 359 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 RABL3Q5HYI8 236 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 CDCA2Q69YH5 1023 aaPredicted RBP11.16□□□□□ -0.62
LAMA4-201ENST00000230538 ANO7Q6IWH7 933 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 SLC15A3Q8IY34 581 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 DCAF4L2Q8NA75 395 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 SEC14L1Q92503 715 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 SLC30A2Q9BRI3 323 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.16□□□□□ -0.62
LAMA4-201ENST00000230538 SMG9Q9H0W8 520 aaKnown RBP11.16□□□□□ -0.62
LAMA4-201ENST00000230538 MGAT4BQ9UQ53 548 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 SMIM30A4D0T7 59 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 HERV-K104P61576 105 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 ZNF763Q0D2J5 394 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 MAPK15Q8TD08 544 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 KCNH6Q9H252 994 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 INSL5Q9Y5Q6 135 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 MED1Q15648 1581 aaPredicted RBP11.16□□□□□ -0.62
LAMA4-201ENST00000230538 NFAT5O94916 1531 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 H0YJX3 145 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 TYRP1P17643 537 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 UQCRC2P22695 453 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 ELK4P28324 431 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 SLC11A1P49279 550 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 RPS3AP61247 264 aaKnown RBP11.16□□□□□ -0.62
LAMA4-201ENST00000230538 ID2Q02363 134 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 TRAM2Q15035 370 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 TMEM126BQ8IUX1 230 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 ZNF431Q8TF32 576 aaPredicted RBP11.16□□□□□ -0.62
LAMA4-201ENST00000230538 SYT17Q9BSW7 474 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 SLC5A7Q9GZV3 580 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 DLGAP4Q9Y2H0 992 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 WDR45Q9Y484 360 aa11.16□□□□□ -0.62
LAMA4-201ENST00000230538 PROM1O43490 865 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 FESP07332 822 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 AGTR2P50052 363 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 DNAJB13P59910 316 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 GRM2Q14416 872 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 RAB39AQ14964 217 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 PPP1R3AQ16821 1122 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 SLC35F1Q5T1Q4 408 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 REEP3Q6NUK4 255 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 BORCS8Q96FH0 119 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 TTTY10Q9BZA0 68 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 HCN4Q9Y3Q4 1203 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 GLOD5A6NK44 160 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 CAPN5O15484 640 aaPredicted RBP11.15□□□□□ -0.62
LAMA4-201ENST00000230538 HSPA12AO43301 675 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 HLA-EP13747 358 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 SYN1P17600 705 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 ATP4BP51164 291 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 PSMA6P60900 246 aaKnown RBP11.15□□□□□ -0.62
LAMA4-201ENST00000230538 PLEKHS1Q5SXH7 462 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 BEND4Q6ZU67 534 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 OR4C15Q8NGM1 316 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 MOAP1Q96BY2 351 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 HSPBAP1Q96EW2 488 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 TMEM41AQ96HV5 264 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 SMOQ99835 787 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 NPLQ9BXD5 320 aaPredicted RBP11.15□□□□□ -0.62
LAMA4-201ENST00000230538 LIN28AQ9H9Z2 209 aaKnown RBP11.15□□□□□ -0.62
LAMA4-201ENST00000230538 MS4A12Q9NXJ0 267 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 J3QRK9 145 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 SOX1O00570 391 aaPredicted RBP11.15□□□□□ -0.62
LAMA4-201ENST00000230538 BCAS2O75934 225 aaPredicted RBP11.15□□□□□ -0.62
LAMA4-201ENST00000230538 ZNF33AQ06730 810 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 FBXL8Q96CD0 374 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 C17orf62Q9BQA9 187 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 IRF2BPLQ9H1B7 796 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 REEP4Q9H6H4 257 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 PTGES2Q9H7Z7 377 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 POPDC3Q9HBV1 291 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 GLS2Q9UI32 602 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 GPR89AB7ZAQ6 455 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 CNTN5O94779 1100 aa11.15□□□□□ -0.62
LAMA4-201ENST00000230538 GPR89BP0CG08 455 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms