RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TAGLNQ01995 201 aaKnown RBP16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 PTPRRQ15256 657 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 MICAQ29983 383 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 EXOC3L2Q2M3D2 409 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 SPATA2LQ8IUW3 424 aaPredicted RBP16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 OR9Q2Q8NGE9 314 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 UBTD2Q8WUN7 234 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 SELENOMQ8WWX9 145 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 MSLNLQ96KJ4 702 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 MCOLN1Q9GZU1 580 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 A0A1W2PQL4 384 aaPredicted RBP16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 HYKKA2RU49 373 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 DRGXA6NNA5 263 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 CPSF4O95639 269 aaKnown RBP16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 OR4Q2P0C623 313 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 TNFRSF1BP20333 461 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 SSTR4P31391 388 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 CDH12P55289 794 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 CDC42P60953 191 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 SPIBQ01892 262 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 LCN1P1Q5VSP4 162 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 TRIM69Q86WT6 500 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 CREB3L4Q8TEY5 395 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 ARMC5Q96C12 935 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 MYEOVQ96EZ4 313 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 EXOC2Q96KP1 924 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 CASD1Q96PB1 797 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 B3GNT4Q9C0J1 378 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 TLR8Q9NR97 1041 aaKnown RBP16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 CLN6Q9NWW5 311 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 HCN4Q9Y3Q4 1203 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 PDPK1O15530 556 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 CDRT1O95170 752 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 CLDN9O95484 217 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 CTPS1P17812 591 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 WNT3P56703 355 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 MADCAM1Q13477 382 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 PXDC1Q5TGL8 231 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 SLC44A2Q8IWA5 706 aaPredicted RBP16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 STK40Q8N2I9 435 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 SLC25A46Q96AG3 418 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 APIPQ96GX9 242 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 VWA8A3KMH1 1905 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 WWP2O00308 870 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 HOXA2O43364 376 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 SCN2BO60939 215 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 CSO75390 466 aaKnown RBP16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 PIPP12273 146 aaPredicted RBP16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 NAGAP17050 411 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 CTRB1P17538 263 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 MAPK1P28482 360 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 PTGS2P35354 604 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 POU6F2P78424 691 aaPredicted RBP16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 TLE2Q04725 743 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 PTGES3Q15185 160 aaKnown RBP16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 CTRB2Q6GPI1 263 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 CLECL1Q8IZS7 167 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 LKAAEAR1Q8TD35 194 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 SCLYQ96I15 445 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 FAM193BQ96PV7 902 aaPredicted RBP16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 CLEC2DQ9UHP7 191 aa16.97■□□□□ 0.31
CDKN1B-201ENST00000228872 PTX3P26022 381 aaPredicted RBP16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 EFEMP1Q12805 493 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 HNRNPA0Q13151 305 aaKnown RBP16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 HKDC1Q2TB90 917 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 PTRHD1Q6GMV3 140 aaKnown RBP16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 MBOAT1Q6ZNC8 495 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 PTCHD4Q6ZW05 846 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 MAL2Q969L2 176 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 KIAA1143Q96AT1 154 aaPredicted RBP16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 CMTM7Q96FZ5 175 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 APOLD1Q96LR9 279 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 CIPCQ9C0C6 399 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 TRIM45Q9H8W5 580 aaPredicted RBP16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 NDRG2Q9UN36 371 aaKnown RBP16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 LTBP2Q14767 1821 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 PDGFAP04085 211 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 CLEC2LP0C7M8 214 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 POU2F1P14859 743 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 RGS4P49798 205 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 SPHARQ15513 63 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 UGT8Q16880 541 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 SCN4BQ8IWT1 228 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 BBS7Q8IWZ6 715 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 C1QTNF7Q9BXJ2 289 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 TPT1P8Q9HAU6 139 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 MCUBQ9NWR8 336 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 SH3BP4Q9P0V3 963 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 PLEKHB1Q9UF11 243 aaPredicted RBP16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 LRFN2Q9ULH4 789 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 SSR3Q9UNL2 185 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 PCDHB1Q9Y5F3 818 aa16.96■□□□□ 0.31
CDKN1B-201ENST00000228872 TRAV19A0A0A6YYK7 116 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 A0A0D9SEW6 157 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 LINC00862A6NCI5 91 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 SNTNA6NMZ2 147 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 INSIG1O15503 277 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 PROM1O43490 865 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms