RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 POLR2IP36954 125 aaKnown RBP9.39□□□□□ -0.91
CRX-201ENST00000221996 FEN1P39748 380 aaKnown RBP9.39□□□□□ -0.91
CRX-201ENST00000221996 RBBP4Q09028 425 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 FADDQ13158 208 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 COL9A2Q14055 689 aaPredicted RBP9.39□□□□□ -0.91
CRX-201ENST00000221996 ZNF829Q3KNS6 432 aaPredicted RBP9.39□□□□□ -0.91
CRX-201ENST00000221996 TCEAL5Q5H9L2 206 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 SHQ1Q6PI26 577 aaKnown RBP9.39□□□□□ -0.91
CRX-201ENST00000221996 C16orf78Q8WTQ4 265 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 TESCQ96BS2 214 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 CLIP3Q96DZ5 547 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 CPPED1Q9BRF8 314 aaPredicted RBP9.39□□□□□ -0.91
CRX-201ENST00000221996 BHLHE41Q9C0J9 482 aaPredicted RBP9.39□□□□□ -0.91
CRX-201ENST00000221996 DCSTAMPQ9H295 470 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 NDOR1Q9UHB4 597 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 ZNF225Q9UK10 706 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 BTBD3Q9Y2F9 522 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 OR1A2Q9Y585 309 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 VILLO15195 856 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 CYP17A1P05093 508 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 ALPLP05186 524 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 RPLP0P05388 317 aaKnown RBP9.39□□□□□ -0.91
CRX-201ENST00000221996 TFPTP0C1Z6 253 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 NT5EP21589 574 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 CPN2P22792 545 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 CCR4P51679 360 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 ILF3Q12906 894 aaKnown RBP eCLIP9.39□□□□□ -0.91
CRX-201ENST00000221996 RGNQ15493 299 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 EXOC3L2Q2M3D2 409 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 HNRNPA1L2Q32P51 320 aaKnown RBP9.39□□□□□ -0.91
CRX-201ENST00000221996 ZNF776Q68DI1 518 aaPredicted RBP9.39□□□□□ -0.91
CRX-201ENST00000221996 ZNF551Q7Z340 670 aaPredicted RBP9.39□□□□□ -0.91
CRX-201ENST00000221996 PARGQ86W56 976 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 OR4E2Q8NGC2 313 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 SIPA1Q96FS4 1042 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 FAM129BQ96TA1 746 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 LHPPQ9H008 270 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 C5AR2Q9P296 337 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 AASSQ9UDR5 926 aa9.39□□□□□ -0.91
CRX-201ENST00000221996 PLXNA1Q9UIW2 1896 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 TRIM43BA6NCK2 446 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 AP1G1O43747 822 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 IMPDH2P12268 514 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 ZNF12P17014 697 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 UQCRC2P22695 453 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 MPIP34949 423 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 XKP51811 444 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 ZNF234Q14588 700 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 MOGQ16653 247 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 LRRC26Q2I0M4 334 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 CCSMST1Q4G0I0 132 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 PPP2R2DQ66LE6 453 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 CAMKK1Q8N5S9 505 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 NATD1Q8N6N6 113 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 C19orf18Q8NEA5 215 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 RAB7BQ96AH8 199 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 CIDECQ96AQ7 238 aaPredicted RBP9.38□□□□□ -0.91
CRX-201ENST00000221996 KXD1Q9BQD3 176 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 FUNDC2Q9BWH2 189 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 ADAP2Q9NPF8 381 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 NUMA1Q14980 2115 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 NUP214P35658 2090 aaPredicted RBP9.38□□□□□ -0.91
CRX-201ENST00000221996 MID1O15344 667 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 IFNA16P05015 189 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 CCDC159P0C7I6 412 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 SHMT2P34897 504 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 AVPR1BP47901 424 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 SLC6A11P48066 632 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 PRLHRP49683 370 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 KCNC4Q03721 635 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 ZNF33BQ06732 778 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 ZNHIT3Q15649 155 aaPredicted RBP9.38□□□□□ -0.91
CRX-201ENST00000221996 KLHL12Q53G59 568 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 CRB2Q5IJ48 1285 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 HMGN2P46Q86SG4 172 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 SERPINA11Q86U17 422 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 SETD7Q8WTS6 366 aaKnown RBP9.38□□□□□ -0.91
CRX-201ENST00000221996 BRF2Q9HAW0 419 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 MAT2BQ9NZL9 334 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 CDV3Q9UKY7 258 aaKnown RBP9.38□□□□□ -0.91
CRX-201ENST00000221996 ASNA1O43681 348 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 CENPAP49450 140 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 NFATC3Q12968 1075 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 RSBN1Q5VWQ0 802 aaPredicted RBP9.38□□□□□ -0.91
CRX-201ENST00000221996 CPZQ66K79 652 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 CDC73Q6P1J9 531 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 TRAF7Q6Q0C0 670 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 Q6ZNB5 142 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 ZSWIM9Q86XI8 627 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.38□□□□□ -0.91
CRX-201ENST00000221996 L3MBTL4Q8NA19 623 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 WDR48Q8TAF3 677 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 RNFT2Q96EX2 444 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 SORBS1Q9BX66 1292 aaKnown RBP9.38□□□□□ -0.91
CRX-201ENST00000221996 VN1R3Q9BXE9 311 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 ITPAQ9BY32 194 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 EHD1Q9H4M9 534 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 IL1RAPQ9NPH3 570 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 KLHL1Q9NR64 748 aa9.38□□□□□ -0.91
CRX-201ENST00000221996 ACSL5Q9ULC5 683 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms