RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Wfikkn2Q7TQN3 571 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tdp1Q8BJ37 609 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gpn2Q8VEJ1 310 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Med27Q9DB40 311 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 1700014D04RikJ3QMS2 983 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cxcr4P70658 359 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Emx2Q04744 253 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ppm1hQ3UYC0 513 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 NifkQ91VE6 317 aaKnown RBP16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 S100a11P50543 98 aaKnown RBP16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 ActbP60710 375 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Actg1P63260 375 aaKnown RBP16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Kcna7Q17ST2 489 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slfnl1Q8BHW9 410 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cngb3Q9JJZ9 694 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Mageb4A2A9R3 556 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm13212B1ASQ7 799 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Fbxl19Q6PB97 674 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Smoc2Q8CD91 447 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Clec4a3Q8JZX6 237 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc29a4Q8R139 528 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 B4galt5Q9JMK0 388 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 NumbQ9QZS3 653 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tmem265E9Q8G3 109 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Dpysl2O08553 572 aaKnown RBP16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc7a2P18581 657 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Entpd1P55772 510 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Vtcn1Q7TSP5 283 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Rnf121Q8R1Z9 327 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr135Q8VEY4 312 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc5a2Q923I7 670 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Sp2Q9D2H6 612 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Noa1Q9JJG9 693 aaKnown RBP16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr675A0A1B0GSE1 317 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm3327F7C9A1 213 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm5724L7N264 670 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Oaz2O08608 189 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Arhgap39P59281 1107 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cpt1aP97742 773 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Amigo2Q80ZD9 519 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ofcc1Q8BGX4 166 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Rdh10Q8VCH7 341 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Q99KU6 348 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Rwdd2bQ99M03 290 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Rhox9Q9EQM5 227 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 NktrP30415 1453 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Fpr-rs3O88537 343 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cyp2b10P12791 500 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tgfb3P17125 410 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ddhd2Q80Y98 699 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cops8Q8VBV7 209 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Glis2Q8VDL9 521 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Arv1Q9D0U9 266 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Kat2aQ9JHD2 830 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Polg2Q9QZM2 459 aa16.08■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Scarf1Q5ND28 820 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr1308Q7TQX0 320 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 NdnfQ8C119 568 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Hsbp1Q9CQZ1 76 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ackr2O08707 378 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 DxoO70348 397 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 ShdO88834 343 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tacr2P30549 384 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 D13Ertd608eQ3UPR8 151 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Stox2Q499E5 926 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Sh3rf1Q69ZI1 892 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Hs3st5Q8BSL4 346 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Agbl2Q8CDK2 862 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Dusp21Q9D9D8 189 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr938Q9EQ93 315 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Mbd4Q9Z2D7 554 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Slc2a7P0C6A1 513 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Glycam1Q02596 151 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 PtprrQ62132 656 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Slc30a7Q9JKN1 378 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Wdr95D3Z7A8 784 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Apoc1P34928 88 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 BC080695Q66JY9 481 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 A4galtQ67BJ4 359 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Q6P2K3 674 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Trim61Q8JZK6 461 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Q91W34 466 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 TesclQ9DAJ7 231 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Psma6Q9QUM9 246 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Padi3Q9Z184 664 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Spta1P08032 2415 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr1511E9PWU0 318 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr1510E9PZZ6 318 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr557E9Q550 322 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Etaa1Q5SVT3 877 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 AftphQ80WT5 931 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Fam163bQ8BUM6 167 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Clec2iQ9WVF9 217 aa16.08■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gm45692D3Z0A0 150 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gm7951E9Q0A2 213 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gm6482F6YHC1 213 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Btg4O70552 250 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 CtsdP18242 410 aaKnown RBP16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ubl4aP21126 157 aaKnown RBP16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ldb1P70662 411 aa16.07■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms