RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	THOC6	Q86W42	341 aa	Known RBP	12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	ZFP41	Q8N8Y5	198 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	ZNF740	Q8NDX6	193 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	HUS1B	Q8NHY5	278 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	IPCEF1	Q8WWN9	437 aa	Predicted RBP	12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	TESC	Q96BS2	214 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SLC35A5	Q9BS91	424 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	CPNE5	Q9HCH3	593 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	ABCB8	Q9NUT2	735 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	PAQR5	Q9NXK6	330 aa	Predicted RBP	12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	KLHL20	Q9Y2M5	609 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	PLXNA4	Q9HCM2	1894 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	EOMES	O95936	686 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	OR56A5	P0C7T3	313 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	TNNI3	P19429	210 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	ETV3	P41162	512 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	RAB25	P57735	213 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	CCDC85B	Q15834	202 aa	Predicted RBP	12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	THOC7	Q6I9Y2	204 aa	Known RBP	12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	MACC1	Q6ZN28	852 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	IL17RD	Q8NFM7	739 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SDHC	Q99643	169 aa	Predicted RBP	12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	TOR4A	Q9NXH8	423 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	B4GALT6	Q9UBX8	382 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	ZNF221	Q9UK13	617 aa		12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	WBP11	Q9Y2W2	641 aa	Known RBP	12.52	□□□□□ -0.41
CHRNA7-223	ENST00000637033	NRG2	O14511	850 aa	Predicted RBP	12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	ENTPD6	O75354	484 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	MAPK1	P28482	360 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	HNF4A	P41235	474 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	TRIM71	Q2Q1W2	868 aa	Known RBP	12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	RETSAT	Q6NUM9	610 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	DPY19L3	Q6ZPD9	716 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SHF	Q7M4L6	423 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	C11orf65	Q8NCR3	313 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	ASB11	Q8WXH4	323 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	TXNDC15	Q96J42	360 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	ASPN	Q9BXN1	380 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SLC29A3	Q9BZD2	475 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	NUFIP1	Q9UHK0	495 aa	Known RBP	12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SH2B3	Q9UQQ2	575 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	GBF1	Q92538	1859 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033		A0A0G2JN53	185 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	RTCA	O00442	366 aa	Known RBP	12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	NME6	O75414	186 aa	Predicted RBP	12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	ALDH9A1	P49189	494 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SCARB2	Q14108	478 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SLC5A12	Q1EHB4	618 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	ZNF181	Q2M3W8	571 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	PNCK	Q6P2M8	343 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	PAMR1	Q6UXH9	720 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	NPAS3	Q8IXF0	933 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SYNPO	Q8N3V7	929 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	MINDY2	Q8NBR6	621 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	HJURP	Q8NCD3	748 aa	Predicted RBP	12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	WDR48	Q8TAF3	677 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	CASD1	Q96PB1	797 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	OR4K3	Q96R72	315 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	WFDC6	Q9BQY6	131 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	ZDHHC3	Q9NYG2	299 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	CARD8	Q9Y2G2	431 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	DOCK6	Q96HP0	2047 aa		12.51	□□□□□ -0.41
CHRNA7-223	ENST00000637033	ARHGEF33	A8MVX0	844 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	AOC2	O75106	756 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SERPINA4	P29622	427 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SOX6	P35712	828 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	ACLY	P53396	1101 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SELENOW	P63302	87 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	TLE2	Q04725	743 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	CSTF3	Q12996	717 aa	Known RBP	12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SSX1	Q16384	188 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	TBRG1	Q3YBR2	411 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	NLRP8	Q86W28	1048 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	KBTBD8	Q8NFY9	601 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	CSGALNACT1	Q8TDX6	532 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	C2orf49	Q9BVC5	232 aa	Predicted RBP	12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	KLF16	Q9BXK1	252 aa	Predicted RBP	12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SLC12A9	Q9BXP2	914 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	GABARAPL1	Q9H0R8	117 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SP140L	Q9H930	580 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	PCDHGA2	Q9Y5H1	932 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SCN10A	Q9Y5Y9	1956 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033		H3BQ06	376 aa	Predicted RBP	12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	GADD45G	O95257	159 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SRC	P12931	536 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	RPS3	P23396	243 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	CTSC	P53634	463 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	DEFA1	P59665	94 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	DEFA3	P59666	94 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	RAE1	P78406	368 aa	Known RBP	12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SRSF11	Q05519	484 aa	Known RBP	12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	FADD	Q13158	208 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	NUMA1	Q14980	2115 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	CDKN3	Q16667	212 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	DEF8	Q6ZN54	512 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	COL21A1	Q96P44	957 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	DEPDC7	Q96QD5	511 aa		12.5	□□□□□ -0.41
CHRNA7-223	ENST00000637033	SLC30A2	Q9BRI3	323 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms