RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 OR7G1Q8NGA0 311 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 OR52J3Q8NH60 311 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 CHFRQ96EP1 664 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 RPP25Q9BUL9 199 aaKnown RBP13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 PRRG3Q9BZD7 231 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 DCSTAMPQ9H295 470 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 CAPN10Q9HC96 672 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 C8orf4Q9NR00 106 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 ACSL6Q9UKU0 697 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 SH2B3Q9UQQ2 575 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 CARD8Q9Y2G2 431 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 N6AMT1Q9Y5N5 214 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 ELOVL7A1L3X0 281 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 CXCR6O00574 342 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 AREL1O15033 823 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 ANXA4P09525 319 aaPredicted RBP13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 EBLN1P0CF75 366 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 ITIH1P19827 911 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 CD22P20273 847 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 PCMT1P22061 227 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 ST13P50502 369 aaKnown RBP13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 MADCAM1Q13477 382 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 SOWAHCQ53LP3 525 aaPredicted RBP13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 NOXRED1Q6NXP6 359 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 TMEM179BQ7Z7N9 219 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 DYNC2LI1Q8TCX1 351 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 NEIL2Q969S2 332 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 PKP4Q99569 1192 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 BEX2Q9BXY8 128 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 XKR8Q9H6D3 395 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 AMBNQ9NP70 447 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 SLC52A3Q9NQ40 469 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 PPT2Q9UMR5 302 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 PCYT1BQ9Y5K3 369 aaPredicted RBP13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 ORC6Q9Y5N6 252 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 PCM1Q15154 2024 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 TFECO14948 347 aaPredicted RBP13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 ATG13O75143 517 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 CYP7B1O75881 506 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 CATP04040 527 aaKnown RBP13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 RAP2AP10114 183 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 ATP4BP51164 291 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 LRRC74AQ0VAA2 488 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 CNTN1Q12860 1018 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 CLCA4Q14CN2 919 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 IRAK1BP1Q5VVH5 260 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 VITQ6UXI7 678 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 UBE2FQ969M7 185 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 CENPOQ9BU64 300 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 RNF167Q9H6Y7 350 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 MOV10Q9HCE1 1003 aaKnown RBP13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 PLXNA3P51805 1871 aa13.92□□□□□ -0.18
SHROOM1-208ENST00000617339 GFRA2O00451 464 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 FPGTO14772 594 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 FAM20BO75063 409 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 LATS1O95835 1130 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 PFKLP17858 780 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 TANGO2Q6ICL3 276 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 BRAT1Q6PJG6 821 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 AHSA2Q719I0 299 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 BTN2A2Q8WVV5 523 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 PDLIM5Q96HC4 596 aaKnown RBP13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 TMEM246Q9BRR3 403 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 SLC12A9Q9BXP2 914 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 RUBCNLQ9H714 662 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 FBXO10Q9UK96 956 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 TRBV5-4A0A0C4DH59 114 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 RPS3P23396 243 aaKnown RBP eCLIP13.91□□□□□ -0.183e-7■■■■■ 39.2
SHROOM1-208ENST00000617339 CRATP43155 626 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 KIR3DL1P43629 444 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 CDK5R2Q13319 367 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 HDDC3Q8N4P3 179 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 ASCC1Q8N9N2 400 aaKnown RBP13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 SUN5Q8TC36 379 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 SLC47A1Q96FL8 570 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 BRINP2Q9C0B6 783 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 KLHL20Q9Y2M5 609 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 GVINP1Q7Z2Y8 2422 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 IGLON5A6NGN9 336 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 PRR35P0CG20 571 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 C6P13671 934 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 ENGP17813 658 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 PFN3P60673 137 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 DAB2P98082 770 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 CAMK2GQ13555 558 aaPredicted RBP13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 LYPLAL1Q5VWZ2 237 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 RIMKLAQ8IXN7 391 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 PIK3C3Q8NEB9 887 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 ARRDC3Q96B67 414 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 MRGPRX3Q96LB0 322 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 IRF2BPLQ9H1B7 796 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 CPNE5Q9HCH3 593 aa13.91□□□□□ -0.18
SHROOM1-208ENST00000617339 PRAMEF33A0A0G2JMD5 474 aa13.9□□□□□ -0.18
SHROOM1-208ENST00000617339 FEZF1A0PJY2 475 aa13.9□□□□□ -0.18
SHROOM1-208ENST00000617339 EVPLLA8MZ36 301 aa13.9□□□□□ -0.18
SHROOM1-208ENST00000617339 C1QTNF3-AMACRE9PGA6 284 aa13.9□□□□□ -0.18
SHROOM1-208ENST00000617339 NME6O75414 186 aaPredicted RBP13.9□□□□□ -0.18
SHROOM1-208ENST00000617339 PSMB5P28074 263 aa13.9□□□□□ -0.18
SHROOM1-208ENST00000617339 MASP1P48740 699 aa13.9□□□□□ -0.18
SHROOM1-208ENST00000617339 ISL1P61371 349 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms