RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 GABRR3A8MPY1 467 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 ADAMTS4O75173 837 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 SRCP12931 536 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CXCR2P25025 360 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 TIE1P35590 1138 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 MLLT10P55197 1068 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PPP2R2BQ00005 443 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CD83Q01151 205 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 TLE2Q04725 743 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 SCN1BQ07699 218 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 MGAT3Q09327 533 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 AQP6Q13520 282 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 IL18Q14116 193 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 ZSWIM7Q19AV6 140 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PROX2Q3B8N5 592 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CEP78Q5JTW2 689 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 LIPKQ5VXJ0 399 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CACTIN-AS1Q8N1I8 211 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 OR7G3Q8NG95 312 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 MBOAT4Q96T53 435 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC30A2Q9BRI3 323 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 SERHL2Q9H4I8 314 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 EHD1Q9H4M9 534 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 REEP4Q9H6H4 257 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PDFQ9HBH1 243 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 SERHLQ9NQF3 203 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 NEU3Q9UQ49 428 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 ITM2BQ9Y287 266 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 GRXCR2A6NFK2 248 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 ISM1B1AKI9 464 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 HAT1O14929 419 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 MMP20O60882 483 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 DNAJB5O75953 348 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PCCBP05166 539 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 H1F0P07305 194 aaKnown RBP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 IL3P08700 152 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CCNYL3P0C7X3 344 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 TIA1P31483 386 aaKnown RBP eCLIP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 RYKP34925 604 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CNR2P34972 360 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PTGER1P34995 402 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 GP2P55259 537 aaKnown RBP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 HEPACAMQ14CZ8 416 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 RGNQ15493 299 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CST9Q5W186 159 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 KIAA1161Q6NSJ0 714 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 SMARCD3Q6STE5 483 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CD300LGQ6UXG3 332 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 TMIGD1Q6UXZ0 262 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 VN1R5Q7Z5H4 357 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 MINDY2Q8NBR6 621 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 KLHL6Q8WZ60 621 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PIK3R3Q92569 461 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 RAD51AP1Q96B01 352 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PDLIM5Q96HC4 596 aaKnown RBP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PKMYT1Q99640 499 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 EFCAB11Q9BUY7 163 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 SORBS1Q9BX66 1292 aaKnown RBP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 UCK2Q9BZX2 261 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 SRRDQ9UH36 339 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 MED16Q9Y2X0 877 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 DNMT3AQ9Y6K1 912 aaPredicted RBP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 DOCK1Q14185 1865 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 ARID1BQ8NFD5 2236 aaPredicted RBP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 GSAPA4D1B5 854 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC35F4A4IF30 521 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 ARHGEF33A8MVX0 844 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 TMEM189-UBE2V1I3L0A0 370 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 J3KTA2 159 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PDPK1O15530 556 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PI15O43692 258 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 RFPL2O75678 378 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 FGBP02675 491 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 RPN2P04844 631 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CLTBP09497 229 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 C8orf89P0DMQ9 161 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 S100A1P23297 94 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 RPS3P23396 243 aaKnown RBP eCLIP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 AOAHP28039 575 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 VIPR1P32241 457 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CSTF2P33240 577 aaKnown RBP eCLIP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 IFNGR2P38484 337 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 RORCP51449 518 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 ITGA1P56199 1179 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 TBPL1P62380 186 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 MLLT1Q03111 559 aaPredicted RBP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 GRSF1Q12849 480 aaKnown RBP eCLIP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PRAMEF14Q5SWL7 426 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PLEKHS1Q5SXH7 462 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PRAMEF13Q5VWM6 474 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 LIPJQ5W064 366 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CCDC80Q76M96 950 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF551Q7Z340 670 aaPredicted RBP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 MEX3DQ86XN8 651 aaKnown RBP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 RIMKLAQ8IXN7 391 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 LILRA3Q8N6C8 439 aaPredicted RBP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 C10orf53Q8N6V4 93 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 OR6Q1Q8NGQ2 317 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC9A6Q92581 669 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms