RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GPATCH2Q9NW75 528 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 CFAP97Q9P2B7 532 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 N6AMT1Q9Y5N5 214 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 KCNE1BA0A087WTH5 132 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 ARHGAP33O14559 1287 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 GASTP01350 101 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 TNNI3P19429 210 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 CYP2A7P20853 494 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 FAHD1Q6P587 224 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 IFNL1Q8IU54 200 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 TMEM161AQ9NX61 479 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 TOR4AQ9NXH8 423 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 KLHL3Q9UH77 587 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 A0A0G2JN53 185 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 TNFSF8P32971 234 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 SOX6P35712 828 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 CD83Q01151 205 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 SRSF11Q05519 484 aaKnown RBP19.6■□□□□ 0.73
SSBP3-216ENST00000610401 SCARB2Q14108 478 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 LRRC26Q2I0M4 334 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 LIPKQ5VXJ0 399 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 TMIGD1Q6UXZ0 262 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 HJURPQ8NCD3 748 aaPredicted RBP19.6■□□□□ 0.73
SSBP3-216ENST00000610401 VPS37AQ8NEZ2 397 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 KLF16Q9BXK1 252 aaPredicted RBP19.6■□□□□ 0.73
SSBP3-216ENST00000610401 CPNE5Q9HCH3 593 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 FBXL12Q9NXK8 326 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 KLHL20Q9Y2M5 609 aa19.6■□□□□ 0.73
SSBP3-216ENST00000610401 ARHGEF33A8MVX0 844 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 HAT1O14929 419 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 GPX5O75715 221 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 UGT2B15P54855 530 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 LSM11P83369 360 aaKnown RBP eCLIP19.59■□□□□ 0.73
SSBP3-216ENST00000610401 DUSP7Q16829 419 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 ABI3BPQ7Z7G0 1075 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 GLCCI1Q86VQ1 547 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 RBM45Q8IUH3 476 aaKnown RBP19.59■□□□□ 0.73
SSBP3-216ENST00000610401 KBTBD8Q8NFY9 601 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 PLXNA4Q9HCM2 1894 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 WBP11Q9Y2W2 641 aaKnown RBP19.59■□□□□ 0.73
SSBP3-216ENST00000610401 RTCAO00442 366 aaKnown RBP19.59■□□□□ 0.73
SSBP3-216ENST00000610401 HOXB9P17482 250 aaPredicted RBP19.59■□□□□ 0.73
SSBP3-216ENST00000610401 RPS19P39019 145 aaKnown RBP19.59■□□□□ 0.73
SSBP3-216ENST00000610401 AP1S1P61966 158 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 BAK1Q16611 211 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 SLC5A12Q1EHB4 618 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 ZFP41Q8N8Y5 198 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 PLD4Q96BZ4 506 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 SLC12A9Q9BXP2 914 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 ZNF334Q9HCZ1 680 aaPredicted RBP19.59■□□□□ 0.73
SSBP3-216ENST00000610401 ZNF221Q9UK13 617 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 SH2B3Q9UQQ2 575 aa19.59■□□□□ 0.73
SSBP3-216ENST00000610401 YARS2Q9Y2Z4 477 aaKnown RBP19.59■□□□□ 0.73
SSBP3-216ENST00000610401 FAM47E-STBD1D6RA91 191 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 TSPAN6O43657 245 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 ENTPD6O75354 484 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 GADD45GO95257 159 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 IGSF6O95976 241 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 CLEC2LP0C7M8 214 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 RPS3P23396 243 aaKnown RBP eCLIP19.58■□□□□ 0.73
SSBP3-216ENST00000610401 TUFMP49411 452 aaKnown RBP19.58■□□□□ 0.73
SSBP3-216ENST00000610401 ATN1P54259 1190 aaPredicted RBP19.58■□□□□ 0.73
SSBP3-216ENST00000610401 DEFA1P59665 94 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 DEFA3P59666 94 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 SLAMF1Q13291 335 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 ATAD3CQ5T2N8 411 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 DEF8Q6ZN54 512 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 SHFQ7M4L6 423 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 C11orf96Q7Z7L8 435 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 MINDY2Q8NBR6 621 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 WDR48Q8TAF3 677 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 TRMT61AQ96FX7 289 aaKnown RBP19.58■□□□□ 0.73
SSBP3-216ENST00000610401 OR4K3Q96R72 315 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 ASPNQ9BXN1 380 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 PAQR5Q9NXK6 330 aaPredicted RBP19.58■□□□□ 0.73
SSBP3-216ENST00000610401 PRKAB1Q9Y478 270 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 YIPF1Q9Y548 306 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 NRG2O14511 850 aaPredicted RBP19.58■□□□□ 0.73
SSBP3-216ENST00000610401 ATP1B2P14415 290 aaPredicted RBP19.58■□□□□ 0.73
SSBP3-216ENST00000610401 SDHBP21912 280 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 CD9P21926 228 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 CTSCP53634 463 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 RAB25P57735 213 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 SELENOWP63302 87 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 C2orf80Q0P641 193 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 ZNF181Q2M3W8 571 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 IQCCQ4KMZ1 466 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 AGTRAPQ6RW13 159 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 CHST9Q7L1S5 443 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 SYNPOQ8N3V7 929 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 FYTTD1Q96QD9 318 aaKnown RBP19.58■□□□□ 0.73
SSBP3-216ENST00000610401 CLSTN3Q9BQT9 956 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 TMEM45AQ9NWC5 275 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 PLAGL1Q9UM63 463 aa19.58■□□□□ 0.73
SSBP3-216ENST00000610401 TMEM229AB2RXF0 380 aa19.58■□□□□ 0.72
SSBP3-216ENST00000610401 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.58■□□□□ 0.72
SSBP3-216ENST00000610401 SCAMP2O15127 329 aaKnown RBP19.58■□□□□ 0.72
SSBP3-216ENST00000610401 KLK1P06870 262 aa19.58■□□□□ 0.72
SSBP3-216ENST00000610401 JUPP14923 745 aa19.58■□□□□ 0.72
SSBP3-216ENST00000610401 C5orf22Q49AR2 442 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms