RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 CYBRD1Q53TN4 286 aa12.67□□□□□ -0.38
USP6NL-205ENST00000609104 GRHL2Q6ISB3 625 aa12.67□□□□□ -0.38
USP6NL-205ENST00000609104 C15orf52Q6ZUT6 534 aaKnown RBP12.67□□□□□ -0.38
USP6NL-205ENST00000609104 OR4K17Q8NGC6 315 aa12.67□□□□□ -0.38
USP6NL-205ENST00000609104 CPNE2Q96FN4 548 aaPredicted RBP12.67□□□□□ -0.38
USP6NL-205ENST00000609104 MT-ND5P03915 603 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 HLA-DPB1P04440 258 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 ACTR1BP42025 376 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 ACTR1AP61163 376 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 SEMA3AQ14563 771 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 ZNF516Q92618 1163 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 GLOD5A6NK44 160 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 GNSP15586 552 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 CD97P48960 835 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 MOGQ16653 247 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 TBC1D15Q8TC07 691 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 BCKDHAP12694 445 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 F8A1P23610 371 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 GNRHRP30968 328 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 RPL26P61254 145 aaKnown RBP12.66□□□□□ -0.38
USP6NL-205ENST00000609104 TIGD5Q53EQ6 642 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 SUSD1Q6UWL2 747 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 KLRG1Q96E93 195 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 CMKLR1Q99788 373 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 FAM124BQ9H5Z6 455 aaPredicted RBP12.66□□□□□ -0.38
USP6NL-205ENST00000609104 FAM159BA6NKW6 160 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 MSL3P1P0C860 447 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 ZNF182P17025 639 aaPredicted RBP12.66□□□□□ -0.38
USP6NL-205ENST00000609104 GARNL3Q5VVW2 1013 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 MAPKAP1Q9BPZ7 522 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 C1orf21Q9H246 121 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 GP1BBP13224 206 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 AGXTP21549 392 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 ISOC1Q96CN7 298 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 ZNF514Q96K75 400 aaPredicted RBP12.66□□□□□ -0.38
USP6NL-205ENST00000609104 EMC3Q9P0I2 261 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 BTBD19C9JJ37 291 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 MSX1P28360 303 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 PIAS4Q8N2W9 510 aaPredicted RBP12.66□□□□□ -0.38
USP6NL-205ENST00000609104 SMARCD2Q92925 531 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 A0A1B0GVI7 797 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 EDNRBP24530 442 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 KCNJ5P48544 419 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 SLC9A3P48764 834 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 RNF144AP50876 292 aaPredicted RBP12.66□□□□□ -0.38
USP6NL-205ENST00000609104 SH3RF2Q8TEC5 729 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 TMEM185BQ9H7F4 350 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 TPT1P8Q9HAU6 139 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 CLCA1A8K7I4 914 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 ADH7P40394 386 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.38
USP6NL-205ENST00000609104 MLIPQ5VWP3 458 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 C2orf15Q8WU43 125 aaKnown RBP12.66□□□□□ -0.38
USP6NL-205ENST00000609104 CDC14AQ9UNH5 594 aa12.66□□□□□ -0.38
USP6NL-205ENST00000609104 TNFRSF10BO14763 440 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 SRPRAP08240 638 aaKnown RBP12.65□□□□□ -0.38
USP6NL-205ENST00000609104 CCND3P30281 292 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-205ENST00000609104 HOXA10P31260 410 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-205ENST00000609104 ACVRL1P37023 503 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 GPR33Q49SQ1 333 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 ZC3HC1Q86WB0 502 aaKnown RBP12.65□□□□□ -0.38
USP6NL-205ENST00000609104 EDARQ9UNE0 448 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 ATRNL1Q5VV63 1379 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 SMPD1P17405 629 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 SLC26A5P58743 744 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 ZNF572Q7Z3I7 529 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-205ENST00000609104 KREMEN2Q8NCW0 462 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 PNPLA2Q96AD5 504 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 GKN1Q9NS71 199 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 CPED1A4D0V7 1026 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 DLX3O60479 287 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 CLEC20AQ6ZU45 233 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 SLC6A7Q99884 636 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 RANBP3Q9H6Z4 567 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-205ENST00000609104 METTL7AQ9H8H3 244 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 EXTL2Q9UBQ6 330 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 CAPN5O15484 640 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-205ENST00000609104 ARHGAP40Q5TG30 622 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 OR10A4Q9H209 315 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 SOX1O00570 391 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-205ENST00000609104 DUSP11O75319 330 aaKnown RBP12.65□□□□□ -0.38
USP6NL-205ENST00000609104 CFHP08603 1231 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 MLLT6P55198 1093 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-205ENST00000609104 SPANXN4Q5MJ08 99 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 LIPKQ5VXJ0 399 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 GPAT4Q86UL3 456 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 OSBPL2Q9H1P3 480 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 C9J4A7 227 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 M0R2N6 131 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 DCKP27707 260 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 PIK3CBP42338 1070 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 TXNRD3NBQ6F5E7 133 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 CD99L2Q8TCZ2 262 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 TUBA1CQ9BQE3 449 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 LRRN3E7EW58 273 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 SOX2P48431 317 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 ENTPD1P49961 510 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 CCDC58Q4VC31 144 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 ALG10BQ5I7T1 473 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 CMASQ8NFW8 434 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms