RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ZDHHC18Q9NUE0 388 aa9.31□□□□□ -0.92
CSMD1-217ENST00000602723 CXorf49A8MYA2 514 aaPredicted RBP9.31□□□□□ -0.92
CSMD1-217ENST00000602723 KLF11O14901 512 aa9.31□□□□□ -0.92
CSMD1-217ENST00000602723 UNGP13051 313 aaPredicted RBP9.31□□□□□ -0.92
CSMD1-217ENST00000602723 ST3GAL4Q11206 333 aa9.31□□□□□ -0.92
CSMD1-217ENST00000602723 WDR26Q9H7D7 661 aa9.31□□□□□ -0.92
CSMD1-217ENST00000602723 TIGARQ9NQ88 270 aa9.31□□□□□ -0.92
CSMD1-217ENST00000602723 ZDHHC3Q9NYG2 299 aa9.31□□□□□ -0.92
CSMD1-217ENST00000602723 HCN4Q9Y3Q4 1203 aa9.31□□□□□ -0.92
CSMD1-217ENST00000602723 DUOX1Q9NRD9 1551 aa9.31□□□□□ -0.92
CSMD1-217ENST00000602723 ZDBF2Q9HCK1 2354 aa9.31□□□□□ -0.92
CSMD1-217ENST00000602723 ARPC4-TTLL3A0A0A6YYG9 625 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 BLOC1S5-TXNDC5H3BN57 136 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 HOXD8P13378 290 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 HOXA10P31260 410 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF41P51814 821 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 C3orf33Q6P1S2 294 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 ZDHHC24Q6UX98 284 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 CYP4V2Q6ZWL3 525 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 SLC15A3Q8IY34 581 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 SLC22A18Q96BI1 424 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 H0YGN5 161 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 S100PP25815 95 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 RAB39AQ14964 217 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 CCDC58Q4VC31 144 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 C1orf52Q8N6N3 182 aaKnown RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 OR9I1Q8NGQ6 314 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 NELFAQ9H3P2 528 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 CPQQ9Y646 472 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 C9IYK1 514 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 H7C417 338 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 GJA9P57773 515 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 SGCBQ16585 318 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 TMEM69Q5SWH9 247 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 PNPLA2Q96AD5 504 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 SCAMP1O15126 338 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 STATHP02808 62 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 MSL3P1P0C860 447 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 CBSLP0DN79 551 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 CBSP35520 551 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 PPP1R8Q12972 351 aaKnown RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 UAP1L1Q3KQV9 507 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 MBLAC2Q68D91 279 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 BAIAP2L2Q6UXY1 529 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 RIOK2Q9BVS4 552 aaKnown RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 FAM120CQ9NX05 1096 aaKnown RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 TAS2R9Q9NYW1 312 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 WASF3Q9UPY6 502 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 NR2E3Q9Y5X4 410 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 A0A1B0GVI7 797 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 TVP23AA6NH52 213 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 SP3Q02447 781 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 OR4C15Q8NGM1 316 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 C2orf15Q8WU43 125 aaKnown RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 C14orf119Q9NWQ9 140 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 SLC22A14Q9Y267 594 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 SLC38A8A6NNN8 435 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 BTBD19C9JJ37 291 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 CASRP41180 1078 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 MAP2K4P45985 399 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 LRRC32Q14392 662 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 LRRC37A5PQ49AS3 106 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 PIGGQ5H8A4 983 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 TMEM236Q5W0B7 351 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF584Q8IVC4 421 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 PLA2G15Q8NCC3 412 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 OR8K3Q8NH51 312 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 NR4A3Q92570 626 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 HIF3AQ9Y2N7 669 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 PCDHA2Q9Y5H9 948 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 BHMG1C9JSJ3 638 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 PPP1R11O60927 126 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 DIRAS1O95057 198 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 GTF2F2P13984 249 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 ENTPD1P49961 510 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 C15orf52Q6ZUT6 534 aaKnown RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 ZFAND2BQ8WV99 257 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 TMEM68Q96MH6 324 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 SLC6A7Q99884 636 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF358Q9NW07 568 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 GRHPRQ9UBQ7 328 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 ST14Q9Y5Y6 855 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 A0A1W2PQ45 241 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 A0A1W2PQY0 241 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 F7P08709 466 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 DNAJB1P25685 340 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 INHBEP58166 350 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 DAOAP59103 153 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 RAB5BP61020 215 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 DGKZQ13574 1117 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 ATP6AP1Q15904 470 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 PLEKHN1Q494U1 663 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-217ENST00000602723 SCAMP5Q8TAC9 235 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 CMTM7Q96FZ5 175 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 FCRL5Q96RD9 977 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 PADI3Q9ULW8 664 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 TCRBV7S3A2A0A539 114 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 FLRT2O43155 660 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 BCKDHAP12694 445 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 ELK4P28324 431 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms