RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 PTDSS1P48651 473 aaKnown RBP19.77■□□□□ 0.76
UPF1-207ENST00000599848 HSD11B2P80365 405 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 HPF1Q9NWY4 346 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 PLEKHA6Q9Y2H5 1048 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 SLC33A1O00400 549 aaPredicted RBP19.77■□□□□ 0.76
UPF1-207ENST00000599848 HCRTR2O43614 444 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 ANXA3P12429 323 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 OR2B6P58173 313 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 SLC17A9Q9BYT1 436 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 PCDHGA3Q9Y5H0 932 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 TLR4O00206 839 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 C1GALT1C1LP0DN25 315 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 CRISP1P54107 249 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 SEMG2Q02383 582 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 LINGO2Q7L985 606 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 RFT1Q96AA3 541 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 CLSTN3Q9BQT9 956 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 YIPF4Q9BSR8 244 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 PACSIN3Q9UKS6 424 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 AIREO43918 545 aa19.77■□□□□ 0.75
UPF1-207ENST00000599848 SNAPC5O75971 98 aa19.77■□□□□ 0.75
UPF1-207ENST00000599848 THBS2P35442 1172 aa19.77■□□□□ 0.75
UPF1-207ENST00000599848 ABHD18Q0P651 414 aa19.77■□□□□ 0.75
UPF1-207ENST00000599848 SPIN3Q5JUX0 258 aa19.77■□□□□ 0.75
UPF1-207ENST00000599848 LGI4Q8N135 537 aa19.77■□□□□ 0.75
UPF1-207ENST00000599848 TMEM74Q96NL1 305 aa19.77■□□□□ 0.75
UPF1-207ENST00000599848 AIFM2Q9BRQ8 373 aa19.77■□□□□ 0.75
UPF1-207ENST00000599848 CD244Q9BZW8 370 aa19.77■□□□□ 0.75
UPF1-207ENST00000599848 TPK1Q9H3S4 243 aa19.77■□□□□ 0.75
UPF1-207ENST00000599848 TPST2O60704 377 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 S1PR1P21453 382 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 CBLBQ13191 982 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 DSC3Q14574 896 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 LNX2Q8N448 690 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 POLDIP3Q9BY77 421 aaKnown RBP19.76■□□□□ 0.75
UPF1-207ENST00000599848 VRTNQ9H8Y1 702 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 CHRNB2P17787 502 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 LRP8Q14114 963 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 C12orf76Q8N812 135 aaPredicted RBP19.76■□□□□ 0.75
UPF1-207ENST00000599848 BORCS5Q969J3 196 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 SLCO1B3Q9NPD5 702 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 PDE10AQ9Y233 779 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 ORC5O43913 435 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 PROS1P07225 676 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 TNFSF4P23510 183 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 GSTM2P28161 218 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 YAP1P46937 504 aaKnown RBP19.76■□□□□ 0.75
UPF1-207ENST00000599848 TOX2Q96NM4 488 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 OR1F2PQ96R84 312 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 KAT8Q9H7Z6 458 aaKnown RBP19.76■□□□□ 0.75
UPF1-207ENST00000599848 EMC8O43402 210 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 ONECUT3O60422 494 aaPredicted RBP19.76■□□□□ 0.75
UPF1-207ENST00000599848 CYBAP13498 195 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 HHEXQ03014 270 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 OLFML1Q6UWY5 402 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 CDH20Q9HBT6 801 aa19.76■□□□□ 0.75
UPF1-207ENST00000599848 CA3P07451 260 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 BCKDHAP12694 445 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 RPS13P62277 151 aaKnown RBP19.75■□□□□ 0.75
UPF1-207ENST00000599848 SWT1Q5T5J6 900 aaKnown RBP19.75■□□□□ 0.75
UPF1-207ENST00000599848 JAGN1Q8N5M9 183 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 OXSMQ9NWU1 459 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 LAMP5Q9UJQ1 280 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 A0A1W2PPL8 197 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 ISPDA4D126 451 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 ZNF840PA6NDX5 716 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 EIF3FO00303 357 aaPredicted RBP19.75■□□□□ 0.75
UPF1-207ENST00000599848 TP73O15350 636 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 S1PR4O95977 384 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 CSTAP01040 98 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 LIN52Q52LA3 116 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 ENPP6Q6UWR7 440 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 GOLGA7Q7Z5G4 137 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 TICAM1Q8IUC6 712 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 TCEAL8Q8IYN2 117 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 GNPDA2Q8TDQ7 276 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 THEM6Q8WUY1 208 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 ZNF689Q96CS4 500 aaPredicted RBP19.75■□□□□ 0.75
UPF1-207ENST00000599848 WDR77Q9BQA1 342 aaPredicted RBP19.75■□□□□ 0.75
UPF1-207ENST00000599848 REEP4Q9H6H4 257 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 RRADP55042 308 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 ANKRD22Q5VYY1 191 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 SLC35B2Q8TB61 432 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 PHF12Q96QT6 1004 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 COPS4Q9BT78 406 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 NELFAQ9H3P2 528 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 DLX3O60479 287 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 FAM155BO75949 473 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 EPCAMP16422 314 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 REEP3Q6NUK4 255 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 CLNKQ7Z7G1 428 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 GID4Q8IVV7 300 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 UMODL1-AS1Q8N2C9 162 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 OR10A4Q9H209 315 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 PCDHGA6Q9Y5G7 932 aa19.75■□□□□ 0.75
UPF1-207ENST00000599848 A6NLC8 198 aa19.74■□□□□ 0.75
UPF1-207ENST00000599848 NOS1APO75052 506 aaPredicted RBP19.74■□□□□ 0.75
UPF1-207ENST00000599848 CNTN5O94779 1100 aa19.74■□□□□ 0.75
UPF1-207ENST00000599848 PBX1P40424 430 aa19.74■□□□□ 0.75
UPF1-207ENST00000599848 ENTPD1P49961 510 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms