RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 TM4SF19Q96DZ7 209 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 OLFM1Q99784 485 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 ERP44Q9BS26 406 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 CDCP1Q9H5V8 836 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 LANCL2Q9NS86 450 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 TAS2R13Q9NYV9 303 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 PDE10AQ9Y233 779 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 SNX24Q9Y343 169 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 SLC22A7Q9Y694 548 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 SPG11Q96JI7 2443 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 PRRG2O14669 202 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 ASNA1O43681 348 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 LCMT2O60294 686 aaKnown RBP13.83□□□□□ -0.2
PNKP-202ENST00000593706 NEURL1O76050 574 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 FHP07954 510 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 PGGT1BP53609 377 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 OLR1P78380 273 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 MEF2AQ02078 507 aaPredicted RBP13.83□□□□□ -0.2
PNKP-202ENST00000593706 C2orf54Q08AI8 447 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 PDIA2Q13087 525 aaKnown RBP13.83□□□□□ -0.2
PNKP-202ENST00000593706 SP140Q13342 867 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 NAE1Q13564 534 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 CDSNQ15517 529 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 SLC25A25Q6KCM7 469 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 SYT10Q6XYQ8 523 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 C3P1Q6ZMU1 363 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 ANKMY2Q8IV38 441 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 SIAH3Q8IW03 269 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 ZNF295-AS1Q8N0V1 137 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 CYP4X1Q8N118 509 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 LGI4Q8N135 537 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 EID3Q8N140 333 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 KIF2BQ8N4N8 673 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 TBC1D19Q8N5T2 526 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 CPSF7Q8N684 471 aaKnown RBP13.83□□□□□ -0.2
PNKP-202ENST00000593706 MFSD9Q8NBP5 474 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 ZNF740Q8NDX6 193 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 FBXO36Q8NEA4 188 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 PLPP5Q8NEB5 264 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 TMEM125Q96AQ2 219 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 TBC1D20Q96BZ9 403 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 PARVBQ9HBI1 364 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 WHRNQ9P202 907 aa13.83□□□□□ -0.2
PNKP-202ENST00000593706 CORO1CQ9ULV4 474 aaPredicted RBP13.83□□□□□ -0.2
PNKP-202ENST00000593706 ZNHIT1O43257 154 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 OR1F1O43749 312 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 NME2P1O60361 137 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 C1QAP02745 245 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 HIST1H2AGP0C0S8 130 aaPredicted RBP13.82□□□□□ -0.2
PNKP-202ENST00000593706 HIST1H2ADP20671 130 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 NME2P22392 152 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 TPP2P29144 1249 aaPredicted RBP13.82□□□□□ -0.2
PNKP-202ENST00000593706 CASQ1P31415 396 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 CYB561P49447 251 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 CCR8P51685 355 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 RGS1Q08116 209 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 PHKG1Q16816 387 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 DEFB134Q4QY38 66 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 HECTD2Q5U5R9 776 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 LCTLQ6UWM7 567 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 CDH24Q86UP0 819 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 RPS19BP1Q86WX3 136 aaKnown RBP13.82□□□□□ -0.2
PNKP-202ENST00000593706 GABPB2Q8TAK5 448 aaPredicted RBP13.82□□□□□ -0.2
PNKP-202ENST00000593706 CA5BP1Q8WTZ4 195 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 HIST1H2AHQ96KK5 128 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 HIST1H2AJQ99878 128 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 HAUS8Q9BT25 410 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 H2AFJQ9BTM1 129 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 SGPP1Q9BX95 441 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 ARL15Q9NXU5 204 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 COQ3Q9NZJ6 369 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 PPT2Q9UMR5 302 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 ARHGAP21Q5T5U3 1957 aa13.82□□□□□ -0.2
PNKP-202ENST00000593706 E9PLN8 166 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 TFECO14948 347 aaPredicted RBP13.81□□□□□ -0.2
PNKP-202ENST00000593706 SLC16A5O15375 505 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 GALR3O60755 368 aaPredicted RBP13.81□□□□□ -0.2
PNKP-202ENST00000593706 B4GALT2O60909 372 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 ALOX12P18054 663 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 KIR3DL1P43629 444 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 MGAT5Q09328 741 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 PWP1Q13610 501 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 ZNF468Q5VIY5 522 aaPredicted RBP13.81□□□□□ -0.2
PNKP-202ENST00000593706 NIPAL1Q6NVV3 410 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 ABHD13Q7L211 337 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 ZC3HC1Q86WB0 502 aaKnown RBP13.81□□□□□ -0.2
PNKP-202ENST00000593706 BBOF1Q8ND07 529 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 ELP5Q8TE02 316 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 PHF10Q8WUB8 498 aaKnown RBP13.81□□□□□ -0.2
PNKP-202ENST00000593706 PYCR2Q96C36 320 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 SDCCAG3Q96C92 435 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 LINGO1Q96FE5 620 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 PTCHD1Q96NR3 888 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 VKORC1Q9BQB6 163 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 PPANQ9NQ55 473 aaKnown RBP13.81□□□□□ -0.2
PNKP-202ENST00000593706 SMYD2Q9NRG4 433 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 IKZF3Q9UKT9 509 aa13.81□□□□□ -0.2
PNKP-202ENST00000593706 TRBC2A0A5B9 178 aa13.8□□□□□ -0.2
PNKP-202ENST00000593706 SAGE2PA6NJ88 616 aa13.8□□□□□ -0.2
PNKP-202ENST00000593706 PSMD12O00232 456 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms