RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 RHBGQ9H310 441 aa13.18□□□□□ -0.3
TRAF4-215ENST00000584944 PFDN4Q9NQP4 134 aa13.18□□□□□ -0.3
TRAF4-215ENST00000584944 AHSPQ9NZD4 102 aa13.18□□□□□ -0.3
TRAF4-215ENST00000584944 TRPC4Q9UBN4 977 aa13.18□□□□□ -0.3
TRAF4-215ENST00000584944 TRPS1Q9UHF7 1281 aa13.18□□□□□ -0.3
TRAF4-215ENST00000584944 CROTQ9UKG9 612 aa13.18□□□□□ -0.3
TRAF4-215ENST00000584944 SLC22A7Q9Y694 548 aa13.18□□□□□ -0.3
TRAF4-215ENST00000584944 ASH1LQ9NR48 2969 aaKnown RBP13.17□□□□□ -0.3
TRAF4-215ENST00000584944 AHCTF1Q8WYP5 2266 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 ARHGAP10A1A4S6 786 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 NPHS1O60500 1241 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 SH3BGRLO75368 114 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 TGFB1P01137 390 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 SERPINE1P05121 402 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 CAPN1P07384 714 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 IL1RNP18510 177 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 CD22P20273 847 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 GRK2P25098 689 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 OR1D4P47884 311 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 SLC18A1P54219 525 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 RAB8AP61006 207 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 BTN3A2P78410 334 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 VAC14Q08AM6 782 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 RCN2Q14257 317 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 TGIF1Q15583 401 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 IMPG1Q17R60 797 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 AP5B1Q2VPB7 878 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 ATG16L1Q676U5 607 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 FAM199XQ6PEV8 388 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-215ENST00000584944 ZCCHC23Q6ZST2 131 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 TIPARPQ7Z3E1 657 aaKnown RBP13.17□□□□□ -0.3
TRAF4-215ENST00000584944 SYVN1Q86TM6 617 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 VASH2Q86V25 355 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 SLC38A9Q8NBW4 561 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 OR9A4Q8NGU2 314 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 CT55Q8WUE5 264 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 TTC9Q92623 222 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 GAL3ST3Q96A11 431 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 RGMAQ96B86 450 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 MOCOSQ96EN8 888 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 GBP5Q96PP8 586 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 KCNC2Q96PR1 638 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 CCNL2Q96S94 520 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-215ENST00000584944 SERPINI1Q99574 410 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 GATA5Q9BWX5 397 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-215ENST00000584944 GSTO2Q9H4Y5 243 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 ZBTB26Q9HCK0 441 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 ZNF282Q9UDV7 671 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-215ENST00000584944 NXT1Q9UKK6 140 aaKnown RBP13.17□□□□□ -0.3
TRAF4-215ENST00000584944 ZNF490Q9ULM2 529 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-215ENST00000584944 FIS1Q9Y3D6 152 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 NAALAD2Q9Y3Q0 740 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 SPACA6W5XKT8 324 aa13.17□□□□□ -0.3
TRAF4-215ENST00000584944 LRIT2A6NDA9 550 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 TMEM114B3SHH9 223 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 H0YIG0 161 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 DYNC1I1O14576 645 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 ATP8B1O43520 1251 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 B3GALT2O43825 422 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 KLHL18O94889 574 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 SNUPNO95149 360 aaKnown RBP13.16□□□□□ -0.3
TRAF4-215ENST00000584944 NSA2O95478 260 aaKnown RBP13.16□□□□□ -0.3
TRAF4-215ENST00000584944 RORAP35398 523 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 FOLR3P41439 243 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 SSR2P43308 183 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 NEK2P51955 445 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 MC1RQ01726 317 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 CLN3Q13286 438 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 DNASE1L3Q13609 305 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 DSG2Q14126 1118 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 KHDRBS2Q5VWX1 349 aaKnown RBP13.16□□□□□ -0.3
TRAF4-215ENST00000584944 LETMD1Q6P1Q0 360 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 CCDC81Q6ZN84 652 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 DTX1Q86Y01 620 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 KIRREL3Q8IZU9 778 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 OR2L5Q8NG80 312 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 CREB3L4Q8TEY5 395 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 AGAP11Q8TF27 550 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 ZNF473Q8WTR7 871 aaKnown RBP13.16□□□□□ -0.3
TRAF4-215ENST00000584944 C10orf90Q96M02 699 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 F2RL3Q96RI0 385 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 SH3GL2Q99962 352 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 FAM117AQ9C073 453 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 SLC6A16Q9GZN6 736 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 MED4Q9NPJ6 270 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 DMRT3Q9NQL9 472 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 SLC12A4Q9UP95 1085 aa13.16□□□□□ -0.3
TRAF4-215ENST00000584944 SNRNP200O75643 2136 aaKnown RBP13.16□□□□□ -0.3
TRAF4-215ENST00000584944 ZNF860A6NHJ4 632 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 MAGEB17A8MXT2 336 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 H3BMH7 237 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 K7ENP7 123 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 SGK494L7N484 410 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 FOXE1O00358 373 aaPredicted RBP13.15□□□□□ -0.3
TRAF4-215ENST00000584944 SAP18O00422 153 aaKnown RBP13.15□□□□□ -0.3
TRAF4-215ENST00000584944 MANBAO00462 879 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 PPP6CO00743 305 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 PRAMEF4O60810 478 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 RDH16O75452 317 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 SASH3O75995 380 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms