RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 OLR1P78380 273 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 OCA2Q04671 838 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 PCDH1Q08174 1060 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 TRAF3Q13114 568 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 DDX39BQ13838 428 aaKnown RBP14.97□□□□□ -0.01
CHD3-215ENST00000572750 HERC3Q15034 1050 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 RBBP7Q16576 425 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 TBR1Q16650 682 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 HIST2H2ACQ16777 129 aaPredicted RBP14.97□□□□□ -0.01
CHD3-215ENST00000572750 CEP85LQ5SZL2 805 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 HIST2H2AA3Q6FI13 130 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 ZYG11AQ6WRX3 759 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 MRGPREQ86SM8 312 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 ZC3H7AQ8IWR0 971 aaKnown RBP14.97□□□□□ -0.01
CHD3-215ENST00000572750 LAS2Q8IYD9 372 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 RNF175Q8N4F7 328 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 OR7G3Q8NG95 312 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 OR5T3Q8NGG3 340 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 STT3BQ8TCJ2 826 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 ATP6V1E2Q96A05 226 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 C1QTNF3Q9BXJ4 246 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 RBCK1Q9BYM8 510 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 RHBGQ9H310 441 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 MKS1Q9NXB0 559 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 NXT1Q9UKK6 140 aaKnown RBP14.97□□□□□ -0.01
CHD3-215ENST00000572750 POLHQ9Y253 713 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 MAN2B2Q9Y2E5 1009 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 IGLV3-12A0A075B6K2 115 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 LRIT2A6NDA9 550 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 VSTM2BA6NLU5 285 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 ERI3O43414 337 aaKnown RBP14.96□□□□□ -0.01
CHD3-215ENST00000572750 GALR3O60755 368 aaPredicted RBP14.96□□□□□ -0.01
CHD3-215ENST00000572750 SH3BGRLO75368 114 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 SPAG7O75391 227 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 ZGLP1P0C6A0 271 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 CREB1P16220 341 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 PRKAA2P54646 552 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 STXBP1P61764 594 aaKnown RBP14.96□□□□□ -0.01
CHD3-215ENST00000572750 KLC1Q07866 573 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 ATP1A4Q13733 1029 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 CPSF6Q16630 551 aaKnown RBP eCLIP14.96□□□□□ -0.01
CHD3-215ENST00000572750 CCDC153Q494R4 210 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 ZNF678Q5SXM1 525 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 BEND6Q5SZJ8 279 aaPredicted RBP14.96□□□□□ -0.01
CHD3-215ENST00000572750 LIPJQ5W064 366 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 CPZQ66K79 652 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 BORAQ6PGQ7 559 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 PRICKLE2Q7Z3G6 844 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 SLC22A9Q8IVM8 553 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 IQCKQ8N0W5 287 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 BANPQ8N9N5 519 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 CCDC63Q8NA47 563 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 UBE2E3Q969T4 207 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 GAL3ST3Q96A11 431 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 MIEF2Q96C03 454 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 MS4A6EQ96DS6 147 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 SEC16BQ96JE7 1060 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 CATSPER2Q96P56 530 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 MESP1Q9BRJ9 268 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 CRB3Q9BUF7 120 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 IQCGQ9H095 443 aaKnown RBP14.96□□□□□ -0.01
CHD3-215ENST00000572750 CENPHQ9H3R5 247 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 MKKSQ9NPJ1 570 aaPredicted RBP14.96□□□□□ -0.01
CHD3-215ENST00000572750 GRID1Q9ULK0 1009 aa14.96□□□□□ -0.01
CHD3-215ENST00000572750 PPP6CO00743 305 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 RGS16O15492 202 aaPredicted RBP14.95□□□□□ -0.02
CHD3-215ENST00000572750 UGDHO60701 494 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 DNAJB6O75190 326 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 JRKO75564 520 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 SUPT7LO94864 414 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 CLDN9O95484 217 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 RECKO95980 971 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 ITGB2P05107 769 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 CD63P08962 238 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 XCR1P46094 333 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 EFNA3P52797 238 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 PLA2G16P53816 162 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 CHAF1BQ13112 559 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 UNC50Q53HI1 259 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 LETMD1Q6P1Q0 360 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 PPP1R32Q7Z5V6 425 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 RAB43Q86YS6 212 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 L3MBTL4Q8NA19 623 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 OR4F6Q8NGB9 312 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 OR51Q1Q8NH59 317 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 HUS1BQ8NHY5 278 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 TRPC4APQ8TEL6 797 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 PPP4R1Q8TF05 950 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 ZNF473Q8WTR7 871 aaKnown RBP14.95□□□□□ -0.02
CHD3-215ENST00000572750 L3HYPDHQ96EM0 354 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 F2RL3Q96RI0 385 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 SMC6Q96SB8 1091 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 MTERF1Q99551 399 aaKnown RBP14.95□□□□□ -0.02
CHD3-215ENST00000572750 MS4A8Q9BY19 250 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 REXO4Q9GZR2 422 aaKnown RBP14.95□□□□□ -0.02
CHD3-215ENST00000572750 DMRT3Q9NQL9 472 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 C14orf105Q9NVL8 296 aa14.95□□□□□ -0.02
CHD3-215ENST00000572750 ITPR2Q14571 2701 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 URADA6NGE7 173 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 ARGFXA6NJG6 315 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms