RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ADAMTS3O15072 1205 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 POLR2CP19387 275 aaPredicted RBP13.52□□□□□ -0.25
SPG11-210ENST00000558319 OR1E2P47887 323 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 PREPP48147 710 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 GSK3BP49841 420 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 JAM2P57087 298 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 EEFSECP57772 596 aaKnown RBP13.52□□□□□ -0.25
SPG11-210ENST00000558319 ZNF423Q2M1K9 1284 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 SPRYD7Q5W111 196 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 FAM180BQ6P0A1 224 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 DNAAF1Q8NEP3 725 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 CREB3L1Q96BA8 519 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 TESCQ96BS2 214 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 ARL6Q9H0F7 186 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 OXSMQ9NWU1 459 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 FLRT1Q9NZU1 646 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 GIMAP2Q9UG22 337 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 FBXW11Q9UKB1 542 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 FAM170BA6NMN3 283 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 HTRA3P83110 453 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 SLC29A4Q7RTT9 530 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 ZNF761Q86XN6 746 aaPredicted RBP13.51□□□□□ -0.25
SPG11-210ENST00000558319 GLB1L3Q8NCI6 653 aaPredicted RBP13.51□□□□□ -0.25
SPG11-210ENST00000558319 TRIB2Q92519 343 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 RANBP3Q9H6Z4 567 aaPredicted RBP13.51□□□□□ -0.25
SPG11-210ENST00000558319 CD93Q9NPY3 652 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 THUMPD1Q9NXG2 353 aaKnown RBP13.51□□□□□ -0.25
SPG11-210ENST00000558319 AGAP5A6NIR3 686 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 CENPBD1B2RD01 187 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 KCNJ13O60928 360 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 CASRP41180 1078 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 SIRPB2Q5JXA9 342 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 MOCOSQ96EN8 888 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 CGREF1Q99674 301 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 ASPNQ9BXN1 380 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 YTHDF1Q9BYJ9 559 aaKnown RBP13.51□□□□□ -0.25
SPG11-210ENST00000558319 AJAP1Q9UKB5 411 aaPredicted RBP13.51□□□□□ -0.25
SPG11-210ENST00000558319 KAT6AQ92794 2004 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 SSX4O60224 188 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 CCL5P13501 91 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 TAS2R50P59544 299 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 FAM110CQ1W6H9 321 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 SOWAHAQ2M3V2 549 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 RABL3Q5HYI8 236 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 GEMIN6Q8WXD5 167 aaKnown RBP13.51□□□□□ -0.25
SPG11-210ENST00000558319 PRICKLE1Q96MT3 831 aaPredicted RBP13.51□□□□□ -0.25
SPG11-210ENST00000558319 CLEC3AO75596 197 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 TMEM63AO94886 807 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 SOX2P48431 317 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 ECH1Q13011 328 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 ABHD13Q7L211 337 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 OR4K17Q8NGC6 315 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 TMEM41AQ96HV5 264 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 C2orf74A8MZ97 194 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 LRRN3E7EW58 273 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 MUSKO15146 869 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 SDC3O75056 442 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 DNASE1P24855 282 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 CDH11P55287 796 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 GSCP56915 257 aaPredicted RBP13.51□□□□□ -0.25
SPG11-210ENST00000558319 TMEM44Q2T9K0 475 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 MYLK3Q32MK0 819 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 PRRT3Q5FWE3 981 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 TCEANCQ8N8B7 351 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 LRRN3Q9H3W5 708 aa13.51□□□□□ -0.25
SPG11-210ENST00000558319 AGXTP21549 392 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 MAGEA3P43357 314 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 SMARCD2Q92925 531 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 HSH2DQ96JZ2 352 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 MAN2C1Q9NTJ4 1040 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 TBCCD1Q9NVR7 557 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 SPATA7Q9P0W8 599 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 ZNF670-ZNF695F2Z2N8 137 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 HTRA2O43464 458 aaPredicted RBP13.5□□□□□ -0.25
SPG11-210ENST00000558319 CHRNB2P17787 502 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 IMPDH1P20839 514 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 CCR8P51685 355 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 ASTE1Q2TB18 679 aaPredicted RBP13.5□□□□□ -0.25
SPG11-210ENST00000558319 SLC25A51Q9H1U9 297 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 OR51B6Q9H340 312 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 WRAP73Q9P2S5 460 aaPredicted RBP13.5□□□□□ -0.25
SPG11-210ENST00000558319 TLX3O43711 291 aaPredicted RBP13.5□□□□□ -0.25
SPG11-210ENST00000558319 ZNF254O75437 659 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 HLA-DPB1P04440 258 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 SLC10A6Q3KNW5 377 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 CLDN19Q8N6F1 224 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 ALPK1Q96QP1 1244 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 ZCCHC3Q9NUD5 404 aaKnown RBP13.5□□□□□ -0.25
SPG11-210ENST00000558319 MYEF2Q9P2K5 600 aaKnown RBP13.5□□□□□ -0.25
SPG11-210ENST00000558319 P2RX2Q9UBL9 471 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 NPIPA5E9PKD4 350 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 B4GALT4O60513 344 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 CREG1O75629 220 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 SOX30O94993 753 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 SNAP29O95721 258 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 HTR2AP28223 471 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 SLC26A5P58743 744 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 ZNF616Q08AN1 781 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 TAF1AQ15573 450 aaPredicted RBP13.5□□□□□ -0.25
SPG11-210ENST00000558319 Q8N402 240 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms