RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 UBAC1Q9BSL1 405 aa4.85□□□□□ -1.63
PSEN1-211ENST00000554995 FAM49AQ9H0Q0 323 aaPredicted RBP4.85□□□□□ -1.63
PSEN1-211ENST00000554995 DCLRE1BQ9H816 532 aa4.85□□□□□ -1.63
PSEN1-211ENST00000554995 PPANQ9NQ55 473 aaKnown RBP4.85□□□□□ -1.63
PSEN1-211ENST00000554995 POLE3Q9NRF9 147 aa4.85□□□□□ -1.63
PSEN1-211ENST00000554995 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.85□□□□□ -1.63
PSEN1-211ENST00000554995 FAM153AQ9UHL3 310 aa4.85□□□□□ -1.63
PSEN1-211ENST00000554995 PRDM4Q9UKN5 801 aa4.85□□□□□ -1.63
PSEN1-211ENST00000554995 SATB2Q9UPW6 733 aa4.85□□□□□ -1.63
PSEN1-211ENST00000554995 ERVK-19Q9WJR5 959 aa4.85□□□□□ -1.63
PSEN1-211ENST00000554995 AP1M2Q9Y6Q5 423 aa4.85□□□□□ -1.63
PSEN1-211ENST00000554995 PCSK5Q92824 1860 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 UBE4BO95155 1302 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 A8MVM7 634 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 KRT33AO76009 404 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 AKR7A3O95154 331 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 NGFP01138 241 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 ATP1A1P05023 1023 aaKnown RBP4.84□□□□□ -1.63
PSEN1-211ENST00000554995 GPIP06744 558 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 ITGB6P18564 788 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 SLC6A12P48065 614 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 THBS3P49746 956 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 TKTL1P51854 596 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 OR1D5P58170 312 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 IRX4P78413 519 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 ITGA9Q13797 1035 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 TAF7Q15545 349 aaPredicted RBP4.84□□□□□ -1.63
PSEN1-211ENST00000554995 CEBPEQ15744 281 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 FASTKD1Q53R41 847 aaKnown RBP4.84□□□□□ -1.63
PSEN1-211ENST00000554995 HSP90AA5PQ58FG0 334 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 HERC4Q5GLZ8 1057 aaPredicted RBP4.84□□□□□ -1.63
PSEN1-211ENST00000554995 ZNF776Q68DI1 518 aaPredicted RBP4.84□□□□□ -1.63
PSEN1-211ENST00000554995 RAET1GQ6H3X3 334 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 SLC27A4Q6P1M0 643 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 C17orf107Q6ZR85 190 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 C15orf52Q6ZUT6 534 aaKnown RBP4.84□□□□□ -1.63
PSEN1-211ENST00000554995 C9orf139Q6ZV77 190 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 OR1L3Q8NH93 324 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 HPSE2Q8WWQ2 592 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 SYAP1Q96A49 352 aaPredicted RBP4.84□□□□□ -1.63
PSEN1-211ENST00000554995 BPIFA2Q96DR5 249 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 C16orf58Q96GQ5 468 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 SENP5Q96HI0 755 aaPredicted RBP4.84□□□□□ -1.63
PSEN1-211ENST00000554995 RAB17Q9H0T7 212 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 SIRPDQ9H106 197 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 TRPV6Q9H1D0 765 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 MTIF3Q9H2K0 278 aaKnown RBP4.84□□□□□ -1.63
PSEN1-211ENST00000554995 DPH5Q9H2P9 285 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 RWDD1Q9H446 243 aaPredicted RBP4.84□□□□□ -1.63
PSEN1-211ENST00000554995 PILRAQ9UKJ1 303 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 ETV7Q9Y603 341 aa4.84□□□□□ -1.63
PSEN1-211ENST00000554995 A0A0U1RRA0 63 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 EXTL3O43909 919 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 CIDEAO60543 219 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 CPNE6O95741 557 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 EPOP01588 193 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 ANPEPP15144 967 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 PAX1P15863 534 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 AMD1P17707 334 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 MARCKSP29966 332 aaPredicted RBP4.83□□□□□ -1.64
PSEN1-211ENST00000554995 CCND2P30279 289 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 HSPA1LP34931 641 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 OR1D2P34982 312 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 SLC1A3P43003 542 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 KCNK10P57789 538 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 KCNJ10P78508 379 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 CCZ1BP86790 482 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 CCZ1P86791 482 aaPredicted RBP4.83□□□□□ -1.64
PSEN1-211ENST00000554995 CDR2Q01850 454 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 GPR50Q13585 617 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 CEACAM7Q14002 265 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 DPYSQ14117 519 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 SPHARQ15513 63 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 SPSB3Q6PJ21 355 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 RBMS3Q6XE24 437 aaKnown RBP4.83□□□□□ -1.64
PSEN1-211ENST00000554995 FCRLAQ7L513 359 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 TRMT11Q7Z4G4 463 aaKnown RBP4.83□□□□□ -1.64
PSEN1-211ENST00000554995 SYVN1Q86TM6 617 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 FAM89BQ8N5H3 189 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 KLHDC9Q8NEP7 349 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 APOBEC4Q8WW27 367 aaKnown RBP4.83□□□□□ -1.64
PSEN1-211ENST00000554995 GLYATL1Q969I3 302 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 LYZL4Q96KX0 146 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 TAAR6Q96RI8 345 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 LPAR4Q99677 370 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 SIX2Q9NPC8 291 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 FAM212BQ9NTI7 297 aaPredicted RBP4.83□□□□□ -1.64
PSEN1-211ENST00000554995 ZFP57Q9NU63 452 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 RNF186Q9NXI6 227 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 ELF5Q9UKW6 265 aaPredicted RBP4.83□□□□□ -1.64
PSEN1-211ENST00000554995 PLA2G4CQ9UP65 541 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 PPP2R2CQ9Y2T4 447 aa4.83□□□□□ -1.64
PSEN1-211ENST00000554995 A0A087WUV0 522 aaPredicted RBP4.82□□□□□ -1.64
PSEN1-211ENST00000554995 TRBV4-1A0A0J9YWV2 114 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 SERINC4A6NH21 518 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 OGTO15294 1046 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 NOL3O60936 208 aaKnown RBP4.82□□□□□ -1.64
PSEN1-211ENST00000554995 LRP3O75074 770 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 SAP30O75446 220 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 OR6A2O95222 327 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms