RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 PLLPQ9Y342 182 aa8.84□□□□□ -0.99
CHD8-206ENST00000553870 DSPP15924 2871 aaKnown RBP8.83□□□□□ -1
CHD8-206ENST00000553870 SYNDIG1LA6NDD5 238 aa8.83□□□□□ -1
CHD8-206ENST00000553870 IDSB3KWA1 339 aa8.83□□□□□ -1
CHD8-206ENST00000553870 AGPSO00116 658 aa8.83□□□□□ -1
CHD8-206ENST00000553870 OR7A17O14581 309 aa8.83□□□□□ -1
CHD8-206ENST00000553870 RGS16O15492 202 aaPredicted RBP8.83□□□□□ -1
CHD8-206ENST00000553870 CHST10O43529 356 aa8.83□□□□□ -1
CHD8-206ENST00000553870 PLIN3O60664 434 aa8.83□□□□□ -1
CHD8-206ENST00000553870 SUPT7LO94864 414 aa8.83□□□□□ -1
CHD8-206ENST00000553870 TBX6O95947 436 aaPredicted RBP8.83□□□□□ -1
CHD8-206ENST00000553870 STATHP02808 62 aa8.83□□□□□ -1
CHD8-206ENST00000553870 PROCP04070 461 aa8.83□□□□□ -1
CHD8-206ENST00000553870 HEXBP07686 556 aa8.83□□□□□ -1
CHD8-206ENST00000553870 ZNF888P0CJ79 500 aaPredicted RBP8.83□□□□□ -1
CHD8-206ENST00000553870 CPA3P15088 417 aa8.83□□□□□ -1
CHD8-206ENST00000553870 JAK1P23458 1154 aa8.83□□□□□ -1
CHD8-206ENST00000553870 OTX2P32243 289 aa8.83□□□□□ -1
CHD8-206ENST00000553870 XCR1P46094 333 aa8.83□□□□□ -1
CHD8-206ENST00000553870 MTTPP55157 894 aa8.83□□□□□ -1
CHD8-206ENST00000553870 POLE2P56282 527 aa8.83□□□□□ -1
CHD8-206ENST00000553870 CLCQ05315 142 aa8.83□□□□□ -1
CHD8-206ENST00000553870 ZNF33BQ06732 778 aa8.83□□□□□ -1
CHD8-206ENST00000553870 ASPHQ12797 758 aa8.83□□□□□ -1
CHD8-206ENST00000553870 CUL3Q13618 768 aa8.83□□□□□ -1
CHD8-206ENST00000553870 RBBP7Q16576 425 aa8.83□□□□□ -1
CHD8-206ENST00000553870 TUBB8Q3ZCM7 444 aa8.83□□□□□ -1
CHD8-206ENST00000553870 UNC50Q53HI1 259 aa8.83□□□□□ -1
CHD8-206ENST00000553870 TOR1AIP1Q5JTV8 583 aa8.83□□□□□ -1
CHD8-206ENST00000553870 ZNF678Q5SXM1 525 aa8.83□□□□□ -1
CHD8-206ENST00000553870 DEPDC1Q5TB30 811 aa8.83□□□□□ -1
CHD8-206ENST00000553870 ABHD17CQ6PCB6 329 aa8.83□□□□□ -1
CHD8-206ENST00000553870 TMEM205Q6UW68 189 aa8.83□□□□□ -1
CHD8-206ENST00000553870 VN1R5Q7Z5H4 357 aa8.83□□□□□ -1
CHD8-206ENST00000553870 PPP1R32Q7Z5V6 425 aa8.83□□□□□ -1
CHD8-206ENST00000553870 MRGPREQ86SM8 312 aa8.83□□□□□ -1
CHD8-206ENST00000553870 LAPTM4BQ86VI4 370 aa8.83□□□□□ -1
CHD8-206ENST00000553870 PDSS2Q86YH6 399 aa8.83□□□□□ -1
CHD8-206ENST00000553870 MYLK4Q86YV6 388 aaPredicted RBP8.83□□□□□ -1
CHD8-206ENST00000553870 ZC3H7AQ8IWR0 971 aaKnown RBP8.83□□□□□ -1
CHD8-206ENST00000553870 DTWD1Q8N5C7 304 aa8.83□□□□□ -1
CHD8-206ENST00000553870 BANPQ8N9N5 519 aa8.83□□□□□ -1
CHD8-206ENST00000553870 HUS1BQ8NHY5 278 aa8.83□□□□□ -1
CHD8-206ENST00000553870 ZCCHC10Q8TBK6 192 aa8.83□□□□□ -1
CHD8-206ENST00000553870 METTL21AQ8WXB1 218 aa8.83□□□□□ -1
CHD8-206ENST00000553870 TBC1D20Q96BZ9 403 aa8.83□□□□□ -1
CHD8-206ENST00000553870 KCNC2Q96PR1 638 aa8.83□□□□□ -1
CHD8-206ENST00000553870 SERINC2Q96SA4 455 aa8.83□□□□□ -1
CHD8-206ENST00000553870 SMC6Q96SB8 1091 aa8.83□□□□□ -1
CHD8-206ENST00000553870 MS4A8Q9BY19 250 aa8.83□□□□□ -1
CHD8-206ENST00000553870 ING2Q9H160 280 aa8.83□□□□□ -1
CHD8-206ENST00000553870 SOX17Q9H6I2 414 aaPredicted RBP8.83□□□□□ -1
CHD8-206ENST00000553870 ZBTB26Q9HCK0 441 aa8.83□□□□□ -1
CHD8-206ENST00000553870 SEMA4BQ9NPR2 832 aaPredicted RBP8.83□□□□□ -1
CHD8-206ENST00000553870 ATP13A2Q9NQ11 1180 aa8.83□□□□□ -1
CHD8-206ENST00000553870 ACSS2Q9NR19 701 aa8.83□□□□□ -1
CHD8-206ENST00000553870 P4HTMQ9NXG6 502 aa8.83□□□□□ -1
CHD8-206ENST00000553870 C19orf25Q9UFG5 118 aaPredicted RBP8.83□□□□□ -1
CHD8-206ENST00000553870 C3orf18Q9UK00 162 aa8.83□□□□□ -1
CHD8-206ENST00000553870 EMCNQ9ULC0 261 aa8.83□□□□□ -1
CHD8-206ENST00000553870 G3BP2Q9UN86 482 aaKnown RBP8.83□□□□□ -1
CHD8-206ENST00000553870 RNF11Q9Y3C5 154 aa8.83□□□□□ -1
CHD8-206ENST00000553870 PCDHGB7Q9Y5F8 929 aa8.83□□□□□ -1
CHD8-206ENST00000553870 PCDHGA9Q9Y5G4 932 aaKnown RBP8.83□□□□□ -1
CHD8-206ENST00000553870 FER1L5A0AVI2 2057 aa8.83□□□□□ -1
CHD8-206ENST00000553870 LOC102723996A0A087X1L8 192 aa8.82□□□□□ -1
CHD8-206ENST00000553870 BLACEA4D250 179 aa8.82□□□□□ -1
CHD8-206ENST00000553870 LRRC14BA6NHZ5 514 aa8.82□□□□□ -1
CHD8-206ENST00000553870 G3V2L1 256 aa8.82□□□□□ -1
CHD8-206ENST00000553870 MKRN2OSH3BPM6 223 aa8.82□□□□□ -1
CHD8-206ENST00000553870 PSMD12O00232 456 aaPredicted RBP8.82□□□□□ -1
CHD8-206ENST00000553870 ERI3O43414 337 aaKnown RBP8.82□□□□□ -1
CHD8-206ENST00000553870 B3GALT2O43825 422 aa8.82□□□□□ -1
CHD8-206ENST00000553870 ALOX12BO75342 701 aa8.82□□□□□ -1
CHD8-206ENST00000553870 RDH16O75452 317 aa8.82□□□□□ -1
CHD8-206ENST00000553870 CEACAM4O75871 244 aa8.82□□□□□ -1
CHD8-206ENST00000553870 SCELO95171 688 aa8.82□□□□□ -1
CHD8-206ENST00000553870 FHP07954 510 aa8.82□□□□□ -1
CHD8-206ENST00000553870 PCNAP12004 261 aa8.82□□□□□ -1
CHD8-206ENST00000553870 RNH1P13489 461 aaKnown RBP8.82□□□□□ -1
CHD8-206ENST00000553870 ICAM2P13598 275 aa8.82□□□□□ -1
CHD8-206ENST00000553870 HNRNPH1P31943 449 aaKnown RBP8.82□□□□□ -1
CHD8-206ENST00000553870 ARL1P40616 181 aaPredicted RBP8.82□□□□□ -1
CHD8-206ENST00000553870 PKNOX1P55347 436 aa8.82□□□□□ -1
CHD8-206ENST00000553870 RAB8AP61006 207 aa8.82□□□□□ -1
CHD8-206ENST00000553870 AP2B1P63010 937 aa8.82□□□□□ -1
CHD8-206ENST00000553870 BTN3A2P78410 334 aa8.82□□□□□ -1
CHD8-206ENST00000553870 MAT1AQ00266 395 aaKnown RBP8.82□□□□□ -1
CHD8-206ENST00000553870 ZNF844Q08AG5 666 aa8.82□□□□□ -1
CHD8-206ENST00000553870 LCP2Q13094 533 aa8.82□□□□□ -1
CHD8-206ENST00000553870 IFT88Q13099 833 aa8.82□□□□□ -1
CHD8-206ENST00000553870 TRAF3Q13114 568 aa8.82□□□□□ -1
CHD8-206ENST00000553870 AIMP2Q13155 320 aaKnown RBP8.82□□□□□ -1
CHD8-206ENST00000553870 KCNAB2Q13303 367 aa8.82□□□□□ -1
CHD8-206ENST00000553870 ATP1A4Q13733 1029 aa8.82□□□□□ -1
CHD8-206ENST00000553870 ZRSR2Q15696 482 aaKnown RBP8.82□□□□□ -1
CHD8-206ENST00000553870 CPSF6Q16630 551 aaKnown RBP eCLIP8.82□□□□□ -1
CHD8-206ENST00000553870 SYT16Q17RD7 645 aa8.82□□□□□ -1
CHD8-206ENST00000553870 AP5B1Q2VPB7 878 aa8.82□□□□□ -1
CHD8-206ENST00000553870 KRT71Q3SY84 523 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms