RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 BRINP2Q9C0B6 783 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 TRIT1Q9H3H1 467 aaKnown RBP13.96□□□□□ -0.17
GCFC2-211ENST00000541687 COMMD3Q9UBI1 195 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 ITGB1BP2Q9UKP3 347 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 KCNK6Q9Y257 313 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 PCP4L1A6NKN8 68 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 TLX2O43763 284 aaPredicted RBP13.96□□□□□ -0.17
GCFC2-211ENST00000541687 B3GALT4O96024 378 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 IL3P08700 152 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 ZNF30P17039 623 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 TLX1P31314 330 aaPredicted RBP13.96□□□□□ -0.17
GCFC2-211ENST00000541687 XKP51811 444 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 MGAT3Q09327 533 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 CDK5R2Q13319 367 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 UGT3A2Q3SY77 523 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 CATSPEREQ5SY80 951 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 ANKRD34AQ69YU3 496 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 USP43Q70EL4 1123 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.96□□□□□ -0.17
GCFC2-211ENST00000541687 OR52L1Q8NGH7 329 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 SLC38A4Q969I6 547 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 RELTQ969Z4 430 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 ZBED6CLQ96FA7 236 aaPredicted RBP13.96□□□□□ -0.17
GCFC2-211ENST00000541687 FCRL4Q96PJ5 515 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 XKR8Q9H6D3 395 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 PHPT1Q9NRX4 125 aaPredicted RBP13.96□□□□□ -0.17
GCFC2-211ENST00000541687 PAK1IP1Q9NWT1 392 aaPredicted RBP13.96□□□□□ -0.17
GCFC2-211ENST00000541687 MARCH5Q9NX47 278 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 ABCG2Q9UNQ0 655 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 POFUT2Q9Y2G5 429 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 PCDHB11Q9Y5F2 797 aa13.96□□□□□ -0.17
GCFC2-211ENST00000541687 IGLV3-10A0A075B6K4 115 aa13.96□□□□□ -0.18
GCFC2-211ENST00000541687 HPRP00739 348 aa13.96□□□□□ -0.18
GCFC2-211ENST00000541687 PRG2P13727 222 aa13.96□□□□□ -0.18
GCFC2-211ENST00000541687 NDUFAF6Q330K2 333 aa13.96□□□□□ -0.18
GCFC2-211ENST00000541687 RUNDC3AQ59EK9 446 aa13.96□□□□□ -0.18
GCFC2-211ENST00000541687 Q6ZPB1 254 aaPredicted RBP13.96□□□□□ -0.18
GCFC2-211ENST00000541687 GALNT7Q86SF2 657 aa13.96□□□□□ -0.18
GCFC2-211ENST00000541687 LAPTM4BQ86VI4 370 aa13.96□□□□□ -0.18
GCFC2-211ENST00000541687 FAM210AQ96ND0 272 aa13.96□□□□□ -0.18
GCFC2-211ENST00000541687 C3orf14Q9HBI5 128 aa13.96□□□□□ -0.18
GCFC2-211ENST00000541687 DCAF13Q9NV06 445 aaKnown RBP13.96□□□□□ -0.18
GCFC2-211ENST00000541687 SPATA7Q9P0W8 599 aa13.96□□□□□ -0.18
GCFC2-211ENST00000541687 MKL2Q9ULH7 1088 aa13.96□□□□□ -0.18
GCFC2-211ENST00000541687 BACE2Q9Y5Z0 518 aa13.96□□□□□ -0.18
GCFC2-211ENST00000541687 TGM5O43548 720 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 KELP23276 732 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 HRH2P25021 359 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 PSMA3P25788 255 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 GSTM2P28161 218 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 COPZ1P61923 177 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 CNKSR3Q6P9H4 555 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 TMEM151AQ8N4L1 468 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 TCEANCQ8N8B7 351 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 TBX5Q99593 518 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 REEP4Q9H6H4 257 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 GPR83Q9NYM4 423 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 PHF24Q9UPV7 400 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 PEX16Q9Y5Y5 336 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 LTBP1Q14766 1721 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 POLR2AP24928 1970 aaKnown RBP13.95□□□□□ -0.18
GCFC2-211ENST00000541687 TLR4O00206 839 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 PRLP01236 227 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 NUDT7P0C024 238 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 SAGP10523 405 aaPredicted RBP13.95□□□□□ -0.18
GCFC2-211ENST00000541687 BCAP31P51572 246 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 MC1RQ01726 317 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 FPGSQ05932 587 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 C5orf22Q49AR2 442 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 FAM43BQ6ZT52 329 aaPredicted RBP13.95□□□□□ -0.18
GCFC2-211ENST00000541687 LRRC17Q8N6Y2 441 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 TMEM145Q8NBT3 493 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 FCGR1BQ92637 280 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 CEP295NLQ96MC4 621 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 TUBA1CQ9BQE3 449 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 SLC12A9Q9BXP2 914 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 MCUBQ9NWR8 336 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 ELOVL2Q9NXB9 296 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 CPSF4LA6NMK7 179 aaKnown RBP13.95□□□□□ -0.18
GCFC2-211ENST00000541687 FXYD1O00168 92 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 ERI3O43414 337 aaKnown RBP13.95□□□□□ -0.18
GCFC2-211ENST00000541687 CACNG3O60359 315 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 TIA1P31483 386 aaKnown RBP eCLIP13.95□□□□□ -0.18
GCFC2-211ENST00000541687 LIPJQ5W064 366 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 KIAA1161Q6NSJ0 714 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 SLC5A8Q8N695 610 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 KLHL23Q8NBE8 558 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 NDNFQ8TB73 568 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 BARD1Q99728 777 aaKnown RBP13.95□□□□□ -0.18
GCFC2-211ENST00000541687 DOHHQ9BU89 302 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 STON1Q9Y6Q2 735 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 LRRC37AA6NMS7 1700 aa13.95□□□□□ -0.18
GCFC2-211ENST00000541687 BTN3A3O00478 584 aa13.94□□□□□ -0.18
GCFC2-211ENST00000541687 ACOX3O15254 700 aa13.94□□□□□ -0.18
GCFC2-211ENST00000541687 NFATC1O95644 943 aa13.94□□□□□ -0.18
GCFC2-211ENST00000541687 ALPLP05186 524 aa13.94□□□□□ -0.18
GCFC2-211ENST00000541687 PPIGQ13427 754 aaKnown RBP eCLIP13.94□□□□□ -0.18
GCFC2-211ENST00000541687 LASP1Q14847 261 aaKnown RBP13.94□□□□□ -0.18
GCFC2-211ENST00000541687 ZFP69Q49AA0 526 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms