RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 CYS1Q717R9 158 aa17.92■□□□□ 0.46
TNFRSF1A-212ENST00000539372 KLHDC8AQ8IYD2 350 aa17.92■□□□□ 0.46
TNFRSF1A-212ENST00000539372 PPM1NQ8N819 430 aa17.92■□□□□ 0.46
TNFRSF1A-212ENST00000539372 SUN3Q8TAQ9 357 aa17.92■□□□□ 0.46
TNFRSF1A-212ENST00000539372 M1APQ8TC57 530 aa17.92■□□□□ 0.46
TNFRSF1A-212ENST00000539372 CCT6BQ92526 530 aa17.92■□□□□ 0.46
TNFRSF1A-212ENST00000539372 ZNF354BQ96LW1 612 aa17.92■□□□□ 0.46
TNFRSF1A-212ENST00000539372 PTCHD1Q96NR3 888 aa17.92■□□□□ 0.46
TNFRSF1A-212ENST00000539372 RAB17Q9H0T7 212 aa17.92■□□□□ 0.46
TNFRSF1A-212ENST00000539372 SPTBN1Q01082 2364 aaKnown RBP17.92■□□□□ 0.46
TNFRSF1A-212ENST00000539372 A0A0G2JN53 185 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 WIPF3A6NGB9 483 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 FAM227AF5H4B4 570 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 PRAMEF2O60811 474 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 SMIM10L1P0DMW3 83 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 MAGEA4P43358 317 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 HSPA7P48741 367 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 RAB10P61026 200 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 BTN3A2P78410 334 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 CAV1Q03135 178 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 EFTUD2Q15029 972 aaKnown RBP eCLIP17.91■□□□□ 0.463e-7■■■■■ 60.8
TNFRSF1A-212ENST00000539372 ZKSCAN8Q15776 578 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 ACER2Q5QJU3 275 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 ZNF324BQ6AW86 544 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 H3F3CQ6NXT2 135 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 TMIGD1Q6UXZ0 262 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 CRLF3Q8IUI8 442 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 CYP4X1Q8N118 509 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 SNX31Q8N9S9 440 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 FBF1Q8TES7 1133 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 EXT2Q93063 718 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 SMIM10Q96HG1 83 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 NPAS2Q99743 824 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 MMP25Q9NPA2 562 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 DNAJC11Q9NVH1 559 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 ANKRD10Q9NXR5 420 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 CD274Q9NZQ7 290 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 NAV2Q8IVL1 2488 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 SCN2AQ99250 2005 aa17.91■□□□□ 0.46
TNFRSF1A-212ENST00000539372 NBPF19A0A087WUL8 3843 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 PSMD12O00232 456 aaPredicted RBP17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 PRMT3O60678 531 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 RASAL1O95294 804 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 RNH1P13489 461 aaKnown RBP17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 MAOAP21397 527 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 HNRNPH1P31943 449 aaKnown RBP17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 SPRP35270 261 aaPredicted RBP17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 KCNK10P57789 538 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 SLC26A5P58743 744 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 ATP6V0D1P61421 351 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 STXBP1P61764 594 aaKnown RBP17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 SLC7A5Q01650 507 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 SLMAPQ14BN4 828 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 INAQ16352 499 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 MEP1AQ16819 746 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 GRTP1Q5TC63 336 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 SULT1C3Q6IMI6 304 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 CMC1Q7Z7K0 106 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 KRT78Q8N1N4 520 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 CA13Q8N1Q1 262 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 TCAIMQ8N3R3 496 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 CNOT10Q9H9A5 744 aaKnown RBP17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 RNF112Q9ULX5 631 aa17.9■□□□□ 0.46
TNFRSF1A-212ENST00000539372 ESYT3A0FGR9 886 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 LRRTM2O43300 516 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PRAMEF4O60810 478 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CLDN1O95832 211 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 STX2P32856 288 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 GGT5P36269 586 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 TDGF1P3P51864 188 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PMP22Q01453 160 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 TUBA3CQ13748 450 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ZNF766Q5HY98 468 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PRAMEF9Q5VWM5 478 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ADNP2Q6IQ32 1131 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 TUBA3EQ6PEY2 450 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 QSOX2Q6ZRP7 698 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 RAPH1Q70E73 1250 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ZNF572Q7Z3I7 529 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 KIF2BQ8N4N8 673 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 TTLQ8NG68 377 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 NR4A3Q92570 626 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 KIAA1191Q96A73 305 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 FAR2Q96K12 515 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 UBXN10Q96LJ8 280 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 SIGLEC12Q96PQ1 595 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CAPS2Q9BXY5 557 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PHACTR1Q9C0D0 580 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CLK4Q9HAZ1 481 aaKnown RBP17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 NECTIN3Q9NQS3 549 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 GPRC5BQ9NZH0 403 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ABI3Q9P2A4 366 aa17.89■□□□□ 0.45
TNFRSF1A-212ENST00000539372 LRIT2A6NDA9 550 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 A8MUA0 341 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CLGNO14967 610 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ERI3O43414 337 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CCNT2O60583 730 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 STK16O75716 305 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 S100BP04271 92 aaPredicted RBP17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 MYBL2P10244 700 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms