RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CLDN9O95484 217 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 ETHE1O95571 254 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 TGFB1P01137 390 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 MYL2P10916 166 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 CCNG1P51959 295 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 PLA2G16P53816 162 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 BTN3A2P78410 334 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 CLCQ05315 142 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 DDX39BQ13838 428 aaKnown RBP16.91■□□□□ 0.3
DDX55-204ENST00000536079 RUNX2Q13950 521 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 HERC3Q15034 1050 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 RBBP7Q16576 425 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 HIST2H2ACQ16777 129 aaPredicted RBP16.91■□□□□ 0.3
DDX55-204ENST00000536079 CCDC153Q494R4 210 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 HIST2H2AA3Q6FI13 130 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 MRGPREQ86SM8 312 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 EXOC3L1Q86VI1 746 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 CNPY4Q8N129 248 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 EXD3Q8N9H8 876 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 ARMC2Q8NEN0 867 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 ATP6V1E2Q96A05 226 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 MTFMTQ96DP5 389 aaKnown RBP16.91■□□□□ 0.3
DDX55-204ENST00000536079 MTERF1Q99551 399 aaKnown RBP16.91■□□□□ 0.3
DDX55-204ENST00000536079 SORBS1Q9BX66 1292 aaKnown RBP16.91■□□□□ 0.3
DDX55-204ENST00000536079 TRIM55Q9BYV6 548 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 REXO4Q9GZR2 422 aaKnown RBP16.91■□□□□ 0.3
DDX55-204ENST00000536079 OR51B5Q9H339 312 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 KCNMB2Q9Y691 235 aa16.91■□□□□ 0.3
DDX55-204ENST00000536079 FAM227AF5H4B4 570 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 RTCAO00442 366 aaKnown RBP16.9■□□□□ 0.3
DDX55-204ENST00000536079 SOCS6O14544 535 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 UBFD1O14562 309 aaKnown RBP16.9■□□□□ 0.3
DDX55-204ENST00000536079 RGS16O15492 202 aaPredicted RBP16.9■□□□□ 0.3
DDX55-204ENST00000536079 TYROBPO43914 113 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 UGDHO60701 494 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 ALOX12BO75342 701 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 ERLIN1O75477 346 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 DNAJB5O75953 348 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 OR4F21O95013 312 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 FAM87AP0C7U9 286 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 CPA3P15088 417 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 STXBP1P61764 594 aaKnown RBP16.9■□□□□ 0.3
DDX55-204ENST00000536079 RPS13P62277 151 aaKnown RBP16.9■□□□□ 0.3
DDX55-204ENST00000536079 RHDQ02161 417 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 OCA2Q04671 838 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 PCLAFQ15004 111 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 TCHHL1Q5QJ38 904 aaPredicted RBP16.9■□□□□ 0.3
DDX55-204ENST00000536079 ABHD17CQ6PCB6 329 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 LRIG3Q6UXM1 1119 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 ZNF793Q6ZN11 406 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 ABHD13Q7L211 337 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 MILR1Q7Z6M3 343 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 C10orf107Q8IVU9 208 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 TCP10LQ8TDR4 215 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 GAL3ST3Q96A11 431 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 PEX11GQ96HA9 241 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 SEC16BQ96JE7 1060 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 FAM111AQ96PZ2 611 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 TGIF2Q9GZN2 237 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 TNFRSF12AQ9NP84 129 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 MKKSQ9NPJ1 570 aaPredicted RBP16.9■□□□□ 0.3
DDX55-204ENST00000536079 DMRT3Q9NQL9 472 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 PRDM7Q9NQW5 492 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 FARSBQ9NSD9 589 aaKnown RBP16.9■□□□□ 0.3
DDX55-204ENST00000536079 POLHQ9Y253 713 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 HS3ST3B1Q9Y662 390 aa16.9■□□□□ 0.3
DDX55-204ENST00000536079 ARGFXA6NJG6 315 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 MAGEB17A8MXT2 336 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 ITGB2P05107 769 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 MMP11P24347 488 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 GSTM2P28161 218 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 ARL1P40616 181 aaPredicted RBP16.89■□□□□ 0.29
DDX55-204ENST00000536079 XCR1P46094 333 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 NAGLUP54802 743 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 FAAH2Q6GMR7 532 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 BORAQ6PGQ7 559 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 KIRREL2Q6UWL6 708 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 SLC22A9Q8IVM8 553 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 CA13Q8N1Q1 262 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 CCNYL1Q8N7R7 359 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 CCDC63Q8NA47 563 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 OR2L5Q8NG80 312 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 PPP4R1Q8TF05 950 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 UBE2E3Q969T4 207 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 C8orf44Q96CB5 159 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 CRB3Q9BUF7 120 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 MECRQ9BV79 373 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 SEMA4CQ9C0C4 833 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 VN1R1Q9GZP7 353 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 CENPHQ9H3R5 247 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 LANCL2Q9NS86 450 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 OXSMQ9NWU1 459 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 C3orf18Q9UK00 162 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 MAN2B2Q9Y2E5 1009 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 TSC22D4Q9Y3Q8 395 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 PCDHGA11Q9Y5H2 935 aa16.89■□□□□ 0.29
DDX55-204ENST00000536079 CACNA1GO43497 2377 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 CHD6Q8TD26 2715 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 IDSB3KWA1 339 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 PRPF4O43172 522 aaKnown RBP eCLIP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms