RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 FAM136AQ96C01 138 aa9.73□□□□□ -0.85
COPB1-207ENST00000529866 PTCHD1Q96NR3 888 aa9.73□□□□□ -0.85
COPB1-207ENST00000529866 PCBD2Q9H0N5 130 aa9.73□□□□□ -0.85
COPB1-207ENST00000529866 ATG10Q9H0Y0 220 aa9.73□□□□□ -0.85
COPB1-207ENST00000529866 DEFB127Q9H1M4 99 aa9.73□□□□□ -0.85
COPB1-207ENST00000529866 ZDHHC11Q9H8X9 412 aa9.73□□□□□ -0.85
COPB1-207ENST00000529866 NEUROD4Q9HD90 331 aa9.73□□□□□ -0.85
COPB1-207ENST00000529866 CHRAC1Q9NRG0 131 aa9.73□□□□□ -0.85
COPB1-207ENST00000529866 ERVK-11Q9UQG0 969 aa9.73□□□□□ -0.85
COPB1-207ENST00000529866 A0A0G2JNJ9 132 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 TRBV11-1A0A0K0K1C0 115 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 TCRBV7S3A2A0A539 114 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 FAM166BA8MTA8 275 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 A8MVJ9 347 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 B4GALT2O60909 372 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 WDR1O75083 606 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 ITGA10O75578 1167 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 ATE1O95260 518 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 FMO4P31512 558 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 STIP1P31948 543 aaKnown RBP9.72□□□□□ -0.85
COPB1-207ENST00000529866 KCNJ1P48048 391 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 SSR4P51571 173 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 ADARP55265 1226 aaKnown RBP9.72□□□□□ -0.85
COPB1-207ENST00000529866 SESN2P58004 480 aaPredicted RBP9.72□□□□□ -0.85
COPB1-207ENST00000529866 PCID2Q5JVF3 399 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 NDUFAF5Q5TEU4 345 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 CAPN13Q6MZZ7 669 aaPredicted RBP9.72□□□□□ -0.85
COPB1-207ENST00000529866 CES3Q6UWW8 571 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 GK5Q6ZS86 529 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 MDGA2Q7Z553 956 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 REXO1L1PQ8IX06 675 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 SHISA5Q8N114 240 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 KCT2Q8NC54 265 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 PSD4Q8NDX1 1056 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 OR5T3Q8NGG3 340 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 LPGAT1Q92604 370 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 ARSGQ96EG1 525 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 BIRC8Q96P09 236 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 MDFIQ99750 246 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 MACROD1Q9BQ69 325 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 CCDC77Q9BR77 488 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 ZNF395Q9H8N7 513 aaPredicted RBP9.72□□□□□ -0.85
COPB1-207ENST00000529866 DMRT3Q9NQL9 472 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 TREX1Q9NSU2 369 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 HPF1Q9NWY4 346 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 SYBUQ9NX95 663 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 PAK5Q9P286 719 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 Q9UFV3 132 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 FBXW2Q9UKT8 454 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 VPS9D1Q9Y2B5 631 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 FAM215AQ9Y5M1 114 aa9.72□□□□□ -0.85
COPB1-207ENST00000529866 KIAA1324LA8MWY0 1029 aaPredicted RBP9.71□□□□□ -0.86
COPB1-207ENST00000529866 PSMD12O00232 456 aaPredicted RBP9.71□□□□□ -0.86
COPB1-207ENST00000529866 ZBTB14O43829 449 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 ENO3P13929 434 aaPredicted RBP9.71□□□□□ -0.86
COPB1-207ENST00000529866 MGAT1P26572 445 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 IMPA1P29218 277 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 HOXC12P31275 282 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 TERF1P54274 439 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 TBPL1P62380 186 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 BASP1P80723 227 aaKnown RBP9.71□□□□□ -0.86
COPB1-207ENST00000529866 SNTB1Q13884 538 aaKnown RBP9.71□□□□□ -0.86
COPB1-207ENST00000529866 KCNJ11Q14654 390 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 PCBP2Q15366 365 aaKnown RBP eCLIP9.71□□□□□ -0.862e-11■■■■■ 33.8
COPB1-207ENST00000529866 RPS6KA1Q15418 735 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 TYSND1Q2T9J0 566 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 C1orf185Q5T7R7 199 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 WLSQ5T9L3 541 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 RIPPLY2Q5TAB7 128 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 SHEQ5VZ18 495 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 KIAA0408Q6ZU52 694 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 CXXC5Q7LFL8 322 aaKnown RBP9.71□□□□□ -0.86
COPB1-207ENST00000529866 SLC26A11Q86WA9 606 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 C17orf64Q86WR6 236 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 PRIMA1Q86XR5 153 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 FAM109AQ8N4B1 249 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 AFAP1L2Q8N4X5 818 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 B3GNT7Q8NFL0 401 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 SARAFQ96BY9 339 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 TM4SF19Q96DZ7 209 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 MFSD3Q96ES6 412 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 TCF12Q99081 682 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 FRMD8P1Q9BZ68 369 aaPredicted RBP9.71□□□□□ -0.86
COPB1-207ENST00000529866 TTTY12Q9BZ98 90 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 TSGA10Q9BZW7 698 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 IL22Q9GZX6 179 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 LZTFL1Q9NQ48 299 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 KCMF1Q9P0J7 381 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 SAMD15Q9P1V8 674 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 FOXD3Q9UJU5 478 aaPredicted RBP9.71□□□□□ -0.86
COPB1-207ENST00000529866 ACAD8Q9UKU7 415 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 CBLCQ9ULV8 474 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 YARS2Q9Y2Z4 477 aaKnown RBP9.71□□□□□ -0.86
COPB1-207ENST00000529866 NBEAL1Q6ZS30 2694 aa9.71□□□□□ -0.86
COPB1-207ENST00000529866 TCRBV16S1A1N1A0A5B0 115 aa9.7□□□□□ -0.86
COPB1-207ENST00000529866 FEZF1A0PJY2 475 aa9.7□□□□□ -0.86
COPB1-207ENST00000529866 HSPB2A8KAH6 182 aa9.7□□□□□ -0.86
COPB1-207ENST00000529866 GOLGA8KD6RF30 607 aa9.7□□□□□ -0.86
COPB1-207ENST00000529866 GOLGA8TH3BQL2 631 aa9.7□□□□□ -0.86
COPB1-207ENST00000529866 AP3B1O00203 1094 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms