RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 DDX39BQ13838 428 aaKnown RBP4.49□□□□□ -1.69
SKP1-211ENST00000523359 GIT2Q14161 759 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 UGP2Q16851 508 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 XKR3Q5GH77 459 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 HERC4Q5GLZ8 1057 aaPredicted RBP4.49□□□□□ -1.69
SKP1-211ENST00000523359 C6orf136Q5SQH8 315 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 AP1ARQ63HQ0 302 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 AFTPHQ6ULP2 937 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 KCTD9Q7L273 389 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 CENPQQ7L2Z9 268 aaPredicted RBP4.49□□□□□ -1.69
SKP1-211ENST00000523359 ISCA2Q86U28 154 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 AMZ2Q86W34 360 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 PSTKQ8IV42 348 aaKnown RBP4.49□□□□□ -1.69
SKP1-211ENST00000523359 CDK20Q8IZL9 346 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 MAPKAPK5-AS1Q8N8E1 139 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 ZNF383Q8NA42 475 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 LPCAT1Q8NF37 534 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 DBF4BQ8NFT6 615 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 OR10V1Q8NGI7 309 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 OR52E1Q8NGJ3 308 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 LILRB4Q8NHJ6 448 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 THRSPQ92748 146 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 EXT2Q93063 718 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 TMEM143Q96AN5 459 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 C5orf30Q96GV9 206 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 DDX50Q9BQ39 737 aaKnown RBP4.49□□□□□ -1.69
SKP1-211ENST00000523359 IQCGQ9H095 443 aaKnown RBP4.49□□□□□ -1.69
SKP1-211ENST00000523359 FZD8Q9H461 694 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 ECT2Q9H8V3 914 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 LRRC40Q9H9A6 602 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 FAM114A2Q9NRY5 505 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 PNPLA3Q9NST1 481 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 DNAJC11Q9NVH1 559 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 SMPD3Q9NY59 655 aaPredicted RBP4.49□□□□□ -1.69
SKP1-211ENST00000523359 ANKMY1Q9P2S6 941 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 TRIM10Q9UDY6 481 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 DNPEPQ9ULA0 475 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 PLEKHA6Q9Y2H5 1048 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 TDRKHQ9Y2W6 561 aaKnown RBP4.49□□□□□ -1.69
SKP1-211ENST00000523359 U3KQV3 271 aa4.49□□□□□ -1.69
SKP1-211ENST00000523359 A0A1W2PN81 502 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 FAM230AA0A1W2PPH8 454 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 TRIM49BA6NDI0 452 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 MFSD2BA6NFX1 497 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 ANKRD61A6NGH8 418 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 ACOD1A6NK06 481 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 SMIM1B2RUZ4 78 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 CLIC2O15247 247 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 CLDN3O15551 220 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 AP5Z1O43299 807 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 GMFGO60234 142 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 PRKRAO75569 313 aaKnown RBP4.48□□□□□ -1.69
SKP1-211ENST00000523359 AKR7A3O95154 331 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 GBAP04062 536 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 CSN3P07498 182 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 CA4P22748 312 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 ACP1P24666 158 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 CHMLP26374 656 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 CHRNA3P32297 505 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 PTGER4P35408 488 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 TIMP3P35625 211 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 CHRNA7P36544 502 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 AP3M2P53677 418 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 PRRX1P54821 245 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 VCPP55072 806 aaKnown RBP4.48□□□□□ -1.69
SKP1-211ENST00000523359 ST8SIA6P61647 398 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 SPIBQ01892 262 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 ABRQ12979 859 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 CUL3Q13618 768 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 HNRNPDQ14103 355 aaKnown RBP4.48□□□□□ -1.69
SKP1-211ENST00000523359 VEZF1Q14119 521 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 SQLEQ14534 574 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 ARHGAP19Q14CB8 494 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 CCDC57Q2TAC2 916 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 MCMDC2Q4G0Z9 681 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 ATAD3BQ5T9A4 648 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 CEACAM20Q6UY09 585 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 RTN4RL2Q86UN3 420 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 CUZD1Q86UP6 607 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 NUDT13Q86X67 352 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 ANKRD13CQ8N6S4 541 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 ZNF611Q8N823 705 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 EIF1ADQ8N9N8 165 aaKnown RBP4.48□□□□□ -1.69
SKP1-211ENST00000523359 FAM184AQ8NB25 1140 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 STEAP2Q8NFT2 490 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 KBTBD8Q8NFY9 601 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 NEK11Q8NG66 645 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 OCC1Q8TAD7 63 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 ZNF524Q96C55 264 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 DHTKD1Q96HY7 919 aaPredicted RBP4.48□□□□□ -1.69
SKP1-211ENST00000523359 PRICKLE1Q96MT3 831 aaPredicted RBP4.48□□□□□ -1.69
SKP1-211ENST00000523359 EGFL8Q99944 293 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 ZSCAN5AQ9BUG6 496 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 KATNB1Q9BVA0 655 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 LSG1Q9H089 658 aaKnown RBP4.48□□□□□ -1.69
SKP1-211ENST00000523359 GLT8D2Q9H1C3 349 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 TUFT1Q9NNX1 390 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 RPRD1BQ9NQG5 326 aaKnown RBP4.48□□□□□ -1.69
SKP1-211ENST00000523359 SDR39U1Q9NRG7 319 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms