RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 GOLGA6L10A6NI86 522 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NPIPB13A6NJU9 1138 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ZNF726A6NNF4 738 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FAM177BA6PVY3 158 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 C17orf98A8MV24 154 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MPTX1A8MV57 137 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CDRT15L2A8MXV6 281 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TMEM233B4DJY2 109 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TMEM232C9JQI7 657 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 UBE2Q2LH0YL09 131 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TMEM250H0YL14 139 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 H7C1Q1 480 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 AP4M1O00189 453 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PIK3CDO00329 1044 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GAPDHSO14556 408 aaPredicted RBP-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ZNF195O14628 629 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PPM1DO15297 605 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NCAM2O15394 837 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TREHO43280 583 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SPINT2O43291 252 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CCP110O43303 1012 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NCK2O43639 380 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SCO2O43819 266 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 OR2T1O43869 369 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 EFNA2O43921 213 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PCDHGA12O60330 932 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 EXOC3O60645 756 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PRAMEF10O60809 474 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CUTAO60888 179 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LGR5O75473 907 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RSL1D1O76021 490 aaKnown RBP-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 AQP8O94778 261 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SUN1O94901 812 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NKX2-2O95096 273 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LRATO95237 230 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SIX3O95343 332 aaPredicted RBP-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GJB6O95452 261 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 VNN1O95497 513 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CPNE6O95741 557 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 B3GALT4O96024 378 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IGLV1-51P01701 117 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IGLV3-1P01715 115 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 HLA-DQA2P01906 255 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MBPP02686 304 aaPredicted RBP-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LRG1P02750 347 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 HSPB1P04792 205 aaKnown RBP-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IL4P05112 153 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 JUNP05412 331 aaKnown RBP-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FYNP06241 537 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 THP07101 528 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NEFLP07196 543 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ASGR1P07306 291 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RHOP08100 348 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PFKMP08237 780 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CTSHP09668 335 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TLX1NBP0CAT3 122 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IGHV4-31P0DP07 118 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DBTP11182 482 aaKnown RBP-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MS4A1P11836 297 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CKMT1AP12532 417 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GLULP15104 373 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GOT1P17174 413 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 AKR1C4P17516 323 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NDUFB7P17568 137 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PDE6GP18545 87 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RCC1P18754 421 aaPredicted RBP-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ATF6P18850 670 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 VCAM1P19320 739 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TCN2P20062 427 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 S1PR1P21453 382 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LPOP22079 712 aaPredicted RBP-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SPRR1BP22528 89 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DNAJB2P25686 324 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KLRC2P26717 231 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ADORA2AP29274 412 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 AQP1P29972 269 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MAPK4P31152 587 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MMP12P39900 470 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CAPGP40121 348 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 VHLP40337 213 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 OPRL1P41146 370 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 VIPR2P41587 438 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 HTR2BP41595 481 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TMPOP42166 694 aaKnown RBP-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CA7P43166 264 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SCTRP47872 440 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NR2C2P49116 596 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 STAT5BP51692 787 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CLCN2P51788 898 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 AKR1D1P51857 326 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DGKEP52429 567 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DIO3P55073 304 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GFERP55789 205 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SH3BGRP55822 239 aaPredicted RBP-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RIPPLY3P57055 190 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NXPH1P58417 271 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 EVA1CP58658 441 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SEC61BP60468 96 aaKnown RBP-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ROMO1P60602 79 aa-0.81□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IL13RA1P78552 427 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms