RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 RDH12Q96NR8 316 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 SGPP1Q9BX95 441 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 OR52A5Q9H2C5 316 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 WARS2Q9UGM6 360 aaKnown RBP13.9□□□□□ -0.18
DDX41-208ENST00000507955 TAC3Q9UHF0 121 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 SAMHD1Q9Y3Z3 626 aaKnown RBP13.9□□□□□ -0.18
DDX41-208ENST00000507955 C5orf67F2Z3F1 127 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 MID1O15344 667 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 CBFA2T3O75081 653 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 CD97P48960 835 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 UBE3AQ05086 875 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 SPIN4Q56A73 249 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 NXPE4Q6UWF7 544 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 ABHD11Q8NFV4 315 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 OR2L2Q8NH16 312 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 OR52J3Q8NH60 311 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 CHPT1Q8WUD6 406 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 RPP25Q9BUL9 199 aaKnown RBP13.9□□□□□ -0.18
DDX41-208ENST00000507955 CHST8Q9H2A9 424 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 CCDC177Q9NQR7 707 aaPredicted RBP13.9□□□□□ -0.18
DDX41-208ENST00000507955 C3orf18Q9UK00 162 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 KIAA1549LQ6ZVL6 1849 aa13.9□□□□□ -0.18
DDX41-208ENST00000507955 KIF26AQ9ULI4 1882 aaPredicted RBP13.9□□□□□ -0.19
DDX41-208ENST00000507955 CCDC88CQ9P219 2028 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 A0A0G2JN53 185 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 RFXAPO00287 272 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 PRMT3O60678 531 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 TBX6O95947 436 aaPredicted RBP13.89□□□□□ -0.19
DDX41-208ENST00000507955 ZNF12P17014 697 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 DRD3P35462 400 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 CLK3P49761 638 aaKnown RBP13.89□□□□□ -0.19
DDX41-208ENST00000507955 MVDP53602 400 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 ZNF763Q0D2J5 394 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 CTF1Q16619 201 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 ZNF691Q5VV52 312 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 SHQ1Q6PI26 577 aaKnown RBP13.89□□□□□ -0.19
DDX41-208ENST00000507955 VITQ6UXI7 678 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 CBLL1Q75N03 491 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 HORMAD1Q86X24 394 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.89□□□□□ -0.19
DDX41-208ENST00000507955 C16orf78Q8WTQ4 265 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 TRUB1Q8WWH5 349 aaKnown RBP13.89□□□□□ -0.19
DDX41-208ENST00000507955 TFGQ92734 400 aaPredicted RBP13.89□□□□□ -0.19
DDX41-208ENST00000507955 UCN3Q969E3 161 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 RAD21L1Q9H4I0 556 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 RASSF1Q9NS23 344 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 PNMA8BQ9ULN7 279 aaPredicted RBP13.89□□□□□ -0.19
DDX41-208ENST00000507955 AP3M1Q9Y2T2 418 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 SH3GLB1Q9Y371 365 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 PRAMEF33A0A0G2JMD5 474 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 BCKDKO14874 412 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 ATP6V1G1O75348 118 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 PAK4O96013 591 aaPredicted RBP13.89□□□□□ -0.19
DDX41-208ENST00000507955 IL3P08700 152 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 GJA4P35212 333 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 HPCAL1P37235 193 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 TAS2R38P59533 333 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 RPS26P62854 115 aaKnown RBP13.89□□□□□ -0.19
DDX41-208ENST00000507955 RELAQ04206 551 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 WSCD2Q2TBF2 565 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 PIP5KL1Q5T9C9 394 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 TSEN54Q7Z6J9 526 aaKnown RBP13.89□□□□□ -0.19
DDX41-208ENST00000507955 COQ8BQ96D53 544 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 NRBF2Q96F24 287 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 MAGEB10Q96LZ2 347 aaPredicted RBP13.89□□□□□ -0.19
DDX41-208ENST00000507955 SLC35A5Q9BS91 424 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 ZCCHC2Q9C0B9 1178 aaKnown RBP13.89□□□□□ -0.19
DDX41-208ENST00000507955 SLC6A17Q9H1V8 727 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 EPHX3Q9H6B9 360 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 REEP4Q9H6H4 257 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 BAG5Q9UL15 447 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 ERGIC3Q9Y282 383 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 NAALAD2Q9Y3Q0 740 aa13.89□□□□□ -0.19
DDX41-208ENST00000507955 ALPK3Q96L96 1907 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 NINQ8N4C6 2090 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 WASHC1A8K0Z3 465 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 PPM1DO15297 605 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 HSD3B1P14060 373 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 FCARP24071 287 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 HSD3B2P26439 372 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 ASMTP46597 345 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 GABARAPL2P60520 117 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 KCNJ10P78508 379 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 KCNC4Q03721 635 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 ITGADQ13349 1161 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 SLC5A12Q1EHB4 618 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 WASH2PQ6VEQ5 465 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 MSANTD1Q6ZTZ1 278 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 RTL10Q7L3V2 364 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 AMZ2Q86W34 360 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 HIPK1Q86Z02 1210 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 SNX29P2Q8IUI4 249 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 PIK3C3Q8NEB9 887 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 VPS37AQ8NEZ2 397 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 SPPL2AQ8TCT8 520 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 MACROD1Q9BQ69 325 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 KXD1Q9BQD3 176 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 SELENONQ9NZV5 590 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 ENPP5Q9UJA9 477 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 WDR37Q9Y2I8 494 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms