RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 BST1Q10588 318 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 ST3GAL1Q11201 340 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 NFATC2Q13469 925 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 SELPLGQ14242 412 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 TMEM132DQ14C87 1099 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 LRIT3Q3SXY7 679 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 UGT3A2Q3SY77 523 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 MIDNQ504T8 468 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 EARS2Q5JPH6 523 aaKnown RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 SUSD4Q5VX71 490 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 KIAA0895LQ68EN5 471 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 RTL6Q6ICC9 239 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZNF793Q6ZN11 406 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 Q6ZSN1 163 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 CENPUQ71F23 418 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 CENPQQ7L2Z9 268 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 ATG9AQ7Z3C6 839 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 TECPR1Q7Z6L1 1165 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 MRGPREQ86SM8 312 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 MMD2Q8IY49 270 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 TCAIMQ8N3R3 496 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 BMPERQ8N8U9 685 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 SPERTQ8NA61 448 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 TEX45Q8NA69 505 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 SPATA4Q8NEY3 305 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 BBS1Q8NFJ9 593 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 OR10Q1Q8NGQ4 319 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 SUN5Q8TC36 379 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 RNF128Q8TEB7 428 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 HIST1H2ACQ93077 130 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 RAB39BQ96DA2 213 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 C11orf24Q96F05 449 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 SLC41A3Q96GZ6 507 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 TSNARE1Q96NA8 513 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 RPRD1AQ96P16 312 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 DEFB118Q96PH6 123 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 TUBA1CQ9BQE3 449 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 ALKBH7Q9BT30 221 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 MRPL13Q9BYD1 178 aaKnown RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 SLC7A5P2Q9GIP4 190 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZMYND12Q9H0C1 365 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 GANQ9H2C0 597 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 UBTD1Q9HAC8 227 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 SPAG4Q9NPE6 437 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 AGPAT3Q9NRZ7 376 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 TMEM45AQ9NWC5 275 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 PADI3Q9ULW8 664 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 SRPRBQ9Y5M8 271 aaKnown RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 SLCO1B1Q9Y6L6 691 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 V9GYY5 206 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 PCDH11YQ9BZA8 1340 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 A0A087WUV0 522 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 KIR2DS5A0A0G2JLQ3 304 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 A0A0U1RQS6 177 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 hDV102S1A0JD36 115 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 MBLAC1A4D2B0 266 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 A6NNC1 897 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 C17orf105B2RV13 164 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 KIR2DS3K7RE56 304 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 SDHDO14521 159 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ABCD4O14678 606 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ARPC2O15144 300 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 SYT7O43581 403 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 LCMT2O60294 686 aaKnown RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ECE2O60344 883 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 NMT2O60551 498 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZNF623O75123 536 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 CDH16O75309 829 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 MTRF1O75570 445 aaKnown RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 LDLRP01130 860 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 CALCAP01258 141 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 KRT14P02533 472 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ITGB2P05107 769 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ANXA4P09525 319 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ALPIP09923 528 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 OR8G3PP0DMU2 310 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ACP2P11117 423 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 DBTP11182 482 aaKnown RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 CHRNB1P11230 501 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 CEACAM1P13688 526 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 INSRRP14616 1297 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 FOSL2P15408 326 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 CHRNB2P17787 502 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 MX1P20591 662 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 GJB2P29033 226 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 CDC25AP30304 524 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ALDH1B1P30837 517 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 HSD17B2P37059 387 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 MAGEA11P43364 429 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 HADHBP55084 474 aaKnown RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 RPP38P78345 283 aaKnown RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 IRX3P78415 501 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 CX3CL1P78423 397 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 SIM1P81133 766 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 MAT1AQ00266 395 aaKnown RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 HSF1Q00613 529 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 RELQ04864 619 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 PNRC1Q12796 327 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms