RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TMEM98Q9Y2Y6 226 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 PCDHGB1Q9Y5G3 927 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 A0A1W2PRB8 838 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 ANKDD1BA6NHY2 528 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 TNFRSF21O75509 655 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 BCL10O95999 233 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 ETFAP13804 333 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 ITGA2P17301 1181 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 JUNDP17535 347 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 DDX5P17844 614 aaKnown RBP10.61□□□□□ -0.71
CMSS1-208ENST00000496116 HOXD11P31277 338 aaPredicted RBP10.61□□□□□ -0.71
CMSS1-208ENST00000496116 RRM2P31350 389 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 IL12RB1P42701 662 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 MVDP53602 400 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 CRYBA2P53672 197 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 EMP3P54852 163 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 MC1RQ01726 317 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 CNTN1Q12860 1018 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 GPM6BQ13491 265 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 SCARB2Q14108 478 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 FAHD1Q6P587 224 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 FAM83HQ6ZRV2 1179 aaPredicted RBP10.61□□□□□ -0.71
CMSS1-208ENST00000496116 HEATR4Q86WZ0 1026 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 ZC3H7AQ8IWR0 971 aaKnown RBP10.61□□□□□ -0.71
CMSS1-208ENST00000496116 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.61□□□□□ -0.71
CMSS1-208ENST00000496116 LMNTD1Q8N9Z9 388 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 OR5K2Q8NHB8 316 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 CIDECQ96AQ7 238 aaPredicted RBP10.61□□□□□ -0.71
CMSS1-208ENST00000496116 IL17FQ96PD4 163 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 PCBD2Q9H0N5 130 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 SFXN1Q9H9B4 322 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 CCNB1IP1Q9NPC3 277 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 PRSS16Q9NQE7 514 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 EXD2Q9NVH0 621 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 GPATCH2Q9NW75 528 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 DNMT3AQ9Y6K1 912 aaPredicted RBP10.61□□□□□ -0.71
CMSS1-208ENST00000496116 ZNF99A8MXY4 864 aaPredicted RBP10.6□□□□□ -0.71
CMSS1-208ENST00000496116 XPNPEP2O43895 674 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 MRPS14O60783 128 aaKnown RBP10.6□□□□□ -0.71
CMSS1-208ENST00000496116 PCCBP05166 539 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 MYOGP15173 224 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 PCMT1P22061 227 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 CDK3Q00526 305 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 PIGFQ07326 219 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 NPRL3Q12980 569 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 ZNF630Q2M218 657 aaPredicted RBP10.6□□□□□ -0.71
CMSS1-208ENST00000496116 IQCCQ4KMZ1 466 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 IFI44LQ53G44 452 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 COX20Q5RI15 118 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 ZNF852Q6ZMS4 543 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 PAGE2Q7Z2X7 111 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 ADGRD2Q7Z7M1 963 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 B3GNT8Q7Z7M8 397 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 FAM129CQ86XR2 697 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 SLC30A8Q8IWU4 369 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 NATD1Q8N6N6 113 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 ZNF784Q8NCA9 323 aaPredicted RBP10.6□□□□□ -0.71
CMSS1-208ENST00000496116 PLA2G15Q8NCC3 412 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 ZNF740Q8NDX6 193 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 RORBQ92753 470 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 AIF1LQ9BQI0 150 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 PELI2Q9HAT8 420 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 PAK1IP1Q9NWT1 392 aaPredicted RBP10.6□□□□□ -0.71
CMSS1-208ENST00000496116 GDE1Q9NZC3 331 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 THAP10Q9P2Z0 257 aaPredicted RBP10.6□□□□□ -0.71
CMSS1-208ENST00000496116 PLAGL1Q9UM63 463 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 WBP11Q9Y2W2 641 aaKnown RBP10.6□□□□□ -0.71
CMSS1-208ENST00000496116 PRKAB1Q9Y478 270 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 KLHL33A6NCF5 533 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 TNFRSF11BO00300 401 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 NDUFS2O75306 463 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 SEMA3DO95025 777 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 IL3P08700 152 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 ERGP11308 486 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 ZNF182P17025 639 aaPredicted RBP10.6□□□□□ -0.71
CMSS1-208ENST00000496116 SERPINB1P30740 379 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 FMO3P31513 532 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 SOAT1P35610 550 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 ENTPD1P49961 510 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 MAPK10P53779 464 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 PROX2Q3B8N5 592 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 PIP5KL1Q5T9C9 394 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 CCDC80Q76M96 950 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 GET4Q7L5D6 327 aaPredicted RBP10.6□□□□□ -0.71
CMSS1-208ENST00000496116 SLC9B2Q86UD5 537 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 SFTPA1Q8IWL2 248 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 SVOPQ8N4V2 548 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 RAB42Q8N4Z0 105 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 ZNF540Q8NDQ6 660 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 PITX2Q99697 317 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 ACAT2Q9BWD1 397 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 FUNDC2Q9BWH2 189 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 SLC6A16Q9GZN6 736 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 DUSP21Q9H596 190 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 C1GALT1Q9NS00 363 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 TAC3Q9UHF0 121 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 ICKQ9UPZ9 632 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 ANGPT4Q9Y264 503 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 MAP4K5Q9Y4K4 846 aa10.6□□□□□ -0.71
CMSS1-208ENST00000496116 TMX2-CTNND1H3BSU7 103 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms