RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, human

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFXN4-208	ENST00000490417	AGPAT4	Q9NRZ5	378 aa		12.84	□□□□□ -0.35
SFXN4-208	ENST00000490417	HCN3	Q9P1Z3	774 aa		12.84	□□□□□ -0.35
SFXN4-208	ENST00000490417	ABI3	Q9P2A4	366 aa		12.84	□□□□□ -0.35
SFXN4-208	ENST00000490417	OPTC	Q9UBM4	332 aa		12.84	□□□□□ -0.35
SFXN4-208	ENST00000490417	PTBP2	Q9UKA9	531 aa	Known RBP	12.84	□□□□□ -0.35
SFXN4-208	ENST00000490417	MRPS2	Q9Y399	296 aa	Known RBP	12.84	□□□□□ -0.35
SFXN4-208	ENST00000490417	ANGPTL3	Q9Y5C1	460 aa		12.84	□□□□□ -0.35
SFXN4-208	ENST00000490417	TNPO3	Q9Y5L0	923 aa	Known RBP	12.84	□□□□□ -0.35
SFXN4-208	ENST00000490417	CCDC88C	Q9P219	2028 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417		A0A087WUV0	522 aa	Predicted RBP	12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	SUPT3H	B4E1H0	165 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	RDH16	O75452	317 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	SUPT3H	O75486	399 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	CLEC3A	O75596	197 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	FAM155B	O75949	473 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	ACSL3	O95573	720 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	FH	P07954	510 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	ZNF888	P0CJ79	500 aa	Predicted RBP	12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	SLC35E2B	P0CK96	405 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	COX6A1	P12074	109 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	GFAP	P14136	432 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	EPB42	P16452	691 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	GDF5	P43026	501 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	PIK3CG	P48736	1102 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	HSPA7	P48741	367 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	MLLT10	P55197	1068 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	IRF8	Q02556	426 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	EEF1A2	Q05639	463 aa	Known RBP	12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	SLBP	Q14493	270 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	TLR1	Q15399	786 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	NSDHL	Q15738	373 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	EXT1	Q16394	746 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	SYT16	Q17RD7	645 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	ZXDC	Q2QGD7	858 aa	Predicted RBP	12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	SLC6A19	Q695T7	634 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	FAAH2	Q6GMR7	532 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	METTL2B	Q6P1Q9	378 aa	Known RBP	12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	TRIM40	Q6P9F5	258 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	SLCO4C1	Q6ZQN7	724 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	CPEB2	Q7Z5Q1	589 aa	Known RBP	12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	CMC1	Q7Z7K0	106 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	ISCA2	Q86U28	154 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	RBMXL3	Q8N7X1	1067 aa	Known RBP	12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	GALNT11	Q8NCW6	608 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	PLPP5	Q8NEB5	264 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	SUN3	Q8TAQ9	357 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	EXT2	Q93063	718 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	GAL3ST3	Q96A11	431 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	MIB2	Q96AX9	1013 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	PEX11G	Q96HA9	241 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	CENPK	Q9BS16	269 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	NPL	Q9BXD5	320 aa	Predicted RBP	12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	FUT8	Q9BYC5	575 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	VN1R1	Q9GZP7	353 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	SYNPO2L	Q9H987	977 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	NINJ2	Q9NZG7	142 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	ADGRE2	Q9UHX3	823 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	DMGDH	Q9UI17	866 aa	Known RBP	12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	TMCO1	Q9UM00	188 aa		12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417	MRPS33	Q9Y291	106 aa	Known RBP	12.83	□□□□□ -0.36
SFXN4-208	ENST00000490417		A0A096LPK6	155 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	MAGEB17	A8MXT2	336 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	CLDN4	O14493	209 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	FFAR3	O14843	346 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	GPR42	O15529	346 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	SORBS2	O94875	1100 aa	Known RBP	12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	KLHL2	O95198	593 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	C1QA	P02745	245 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	C2	P06681	752 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	RBP1	P09455	135 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	PRR35	P0CG20	571 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	RNH1	P13489	461 aa	Known RBP	12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	CD97	P48960	835 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	ARG2	P78540	354 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	PHEX	P78562	749 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	MFAP5	Q13361	173 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	OR4D1	Q15615	310 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	INPP5J	Q15735	1006 aa	Predicted RBP	12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	TBCC	Q15814	346 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	TSNAXIP1	Q2TAA8	658 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	B3GNTL1	Q67FW5	361 aa	Predicted RBP	12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	IGFL2	Q6UWQ7	119 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	NOA1	Q8NC60	698 aa	Known RBP	12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	UTP15	Q8TED0	518 aa	Known RBP	12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	REPS1	Q96D71	796 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	LPAR4	Q99677	370 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	CCDC77	Q9BR77	488 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	REXO4	Q9GZR2	422 aa	Known RBP	12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	CDC42EP4	Q9H3Q1	356 aa	Known RBP	12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	COPS7B	Q9H9Q2	264 aa	Predicted RBP	12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	SNX15	Q9NRS6	342 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	COPG2	Q9UBF2	871 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417	SPACA6	W5XKT8	324 aa		12.82	□□□□□ -0.36
SFXN4-208	ENST00000490417		K7EPI3	171 aa		12.81	□□□□□ -0.36
SFXN4-208	ENST00000490417	CDK2AP1	O14519	115 aa		12.81	□□□□□ -0.36
SFXN4-208	ENST00000490417	TAPBP	O15533	448 aa		12.81	□□□□□ -0.36
SFXN4-208	ENST00000490417	CHST10	O43529	356 aa		12.81	□□□□□ -0.36
SFXN4-208	ENST00000490417	B3GALT2	O43825	422 aa		12.81	□□□□□ -0.36
SFXN4-208	ENST00000490417	PRMT3	O60678	531 aa		12.81	□□□□□ -0.36
SFXN4-208	ENST00000490417	COL6A2	P12110	1019 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms