RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 G3V2L1 256 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 TRAFD1O14545 582 aaPredicted RBP3.27□□□□□ -1.89
SSR1-209ENST00000488834 MT-ND2P03891 347 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 MYOGP15173 224 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 HOXC13P31276 330 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 SLC1A3P43003 542 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 PGFP49763 221 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 NDST2P52849 883 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 PTENP60484 403 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 RBP5P82980 135 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 COX10Q12887 443 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 BFSP1Q12934 665 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 ZNF239Q16600 458 aaKnown RBP3.27□□□□□ -1.89
SSR1-209ENST00000488834 CDO1Q16878 200 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 TWISTNBQ3B726 338 aaPredicted RBP3.27□□□□□ -1.89
SSR1-209ENST00000488834 ZRANB3Q5FWF4 1079 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 TCTEX1D4Q5JR98 221 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 CASC4Q6P4E1 433 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 TRAT1Q6PIZ9 186 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 DCLRE1AQ6PJP8 1040 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 Q71RC1 249 aaPredicted RBP3.27□□□□□ -1.89
SSR1-209ENST00000488834 TRMT11Q7Z4G4 463 aaKnown RBP3.27□□□□□ -1.89
SSR1-209ENST00000488834 CATSPER3Q86XQ3 398 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 OR8H3Q8N146 312 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 SIX6OS1Q8N1H7 587 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 ABHD12Q8N2K0 398 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.27□□□□□ -1.89
SSR1-209ENST00000488834 RIT1Q92963 219 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 ATP6V1E2Q96A05 226 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 PDLIM5Q96HC4 596 aaKnown RBP3.27□□□□□ -1.89
SSR1-209ENST00000488834 CCDC114Q96M63 670 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 INTS14Q96SY0 518 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 ADPGKQ9BRR6 497 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 PUS3Q9BZE2 481 aaKnown RBP3.27□□□□□ -1.89
SSR1-209ENST00000488834 TUBB1Q9H4B7 451 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 MINDY3Q9H8M7 445 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 KCNK13Q9HB14 408 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 GTSE1Q9NYZ3 720 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 GTF3C4Q9UKN8 822 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 COL5A2P05997 1499 aaPredicted RBP3.27□□□□□ -1.89
SSR1-209ENST00000488834 IGLV4-3A0A075B6K6 122 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 ACOD1A6NK06 481 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 PDHXO00330 501 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 TLX2O43763 284 aaPredicted RBP3.26□□□□□ -1.89
SSR1-209ENST00000488834 NXPH4O95158 308 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 SLU7O95391 586 aaKnown RBP3.26□□□□□ -1.89
SSR1-209ENST00000488834 RLN1P04808 185 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 GATA2P23769 480 aaPredicted RBP3.26□□□□□ -1.89
SSR1-209ENST00000488834 CTNNA1P35221 906 aaKnown RBP3.26□□□□□ -1.89
SSR1-209ENST00000488834 PTGER3P43115 390 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 NPBWR1P48145 328 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 GMPSP49915 693 aaPredicted RBP3.26□□□□□ -1.89
SSR1-209ENST00000488834 CLCN4P51793 760 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 BTG1P62324 171 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 FKBP3Q00688 224 aaKnown RBP3.26□□□□□ -1.89
SSR1-209ENST00000488834 CD300CQ08708 224 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 CETN1Q12798 172 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 ABRQ12979 859 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 PTK6Q13882 451 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 GRB14Q14449 540 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 MAPK11Q15759 364 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 LRRC37A5PQ49AS3 106 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 HIGD2BQ4VC39 106 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 HECTD3Q5T447 861 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 ZNF841Q6ZN19 808 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 C15orf52Q6ZUT6 534 aaKnown RBP3.26□□□□□ -1.89
SSR1-209ENST00000488834 COX8CQ7Z4L0 72 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 SLC25A42Q86VD7 318 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 MEX3DQ86XN8 651 aaKnown RBP3.26□□□□□ -1.89
SSR1-209ENST00000488834 CDC20BQ86Y33 519 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 SPEM1Q8N4L4 309 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 TEX26Q8N6G2 289 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 POM121L12Q8N7R1 296 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 AMER3Q8N944 861 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 OR5M9Q8NGP3 310 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 OCC1Q8TAD7 63 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 SPPL2AQ8TCT8 520 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 TOMM40LQ969M1 308 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 CDHR1Q96JP9 859 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 TSSK2Q96PF2 358 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 PCDHB18PQ96TA0 734 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 ATF6BQ99941 703 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 RPP25Q9BUL9 199 aaKnown RBP3.26□□□□□ -1.89
SSR1-209ENST00000488834 PAPOLGQ9BWT3 736 aaKnown RBP3.26□□□□□ -1.89
SSR1-209ENST00000488834 PARLQ9H300 379 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 UBQLN3Q9H347 655 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 CTSZQ9UBR2 303 aa3.26□□□□□ -1.89
SSR1-209ENST00000488834 NOCTQ9UK39 431 aaKnown RBP3.26□□□□□ -1.89
SSR1-209ENST00000488834 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.26□□□□□ -1.89
SSR1-209ENST00000488834 HEG1Q9ULI3 1381 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 NEDD4P46934 1319 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 C2orf92A0A1B0GVN3 265 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 GLTPD2A6NH11 291 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 OGTO15294 1046 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 INPP4BO15327 924 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 SIGLEC5O15389 551 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 ECE2O60344 883 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 SNAP91O60641 907 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 ANKRD34CP0C6C1 535 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 PCP11498 1178 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms