RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 SPATA4Q8NEY3 305 aa10.62□□□□□ -0.71
NIPAL3-207ENST00000488155 M1APQ8TC57 530 aa10.62□□□□□ -0.71
NIPAL3-207ENST00000488155 RHBDF1Q96CC6 855 aa10.62□□□□□ -0.71
NIPAL3-207ENST00000488155 ZNF354BQ96LW1 612 aa10.62□□□□□ -0.71
NIPAL3-207ENST00000488155 SIGLEC12Q96PQ1 595 aa10.62□□□□□ -0.71
NIPAL3-207ENST00000488155 OR1F2PQ96R84 312 aa10.62□□□□□ -0.71
NIPAL3-207ENST00000488155 CDCP1Q9H5V8 836 aa10.62□□□□□ -0.71
NIPAL3-207ENST00000488155 PRM3Q9NNZ6 103 aa10.62□□□□□ -0.71
NIPAL3-207ENST00000488155 NSMCE4AQ9NXX6 385 aa10.62□□□□□ -0.71
NIPAL3-207ENST00000488155 WWOXQ9NZC7 414 aa10.62□□□□□ -0.71
NIPAL3-207ENST00000488155 TXNDC16Q9P2K2 825 aa10.62□□□□□ -0.71
NIPAL3-207ENST00000488155 SH3BGRL2Q9UJC5 107 aa10.62□□□□□ -0.71
NIPAL3-207ENST00000488155 TRGV8A0A0C4DH27 118 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 FAM187AA6NFU0 413 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 URADA6NGE7 173 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 GABRR3A8MPY1 467 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 PSMD12O00232 456 aaPredicted RBP10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 CLGNO14967 610 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 TAPBPO15533 448 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 PRMT3O60678 531 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 H2AFYO75367 372 aaKnown RBP10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 FAM155BO75949 473 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 UNC5CO95185 931 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 CYC1P08574 325 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 C1GALT1C1LP0DN25 315 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 IL10P22301 178 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 JAK1P23458 1154 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 CASQ1P31415 396 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 CD96P40200 585 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 SLC6A12P48065 614 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 HSPA7P48741 367 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 PLTPP55058 493 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 SKP1P63208 163 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 BTN3A2P78410 334 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 CDKL1Q00532 357 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 POU4F1Q01851 419 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 OC90Q02509 493 aaPredicted RBP10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 TUBA3CQ13748 450 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 SLBPQ14493 270 aaKnown RBP eCLIP10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 TGFBIQ15582 683 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 TRADDQ15628 312 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 EXT1Q16394 746 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 MEP1AQ16819 746 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 ZNF324BQ6AW86 544 aaPredicted RBP10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 SPINK14Q6IE38 97 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 H3F3CQ6NXT2 135 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 TUBA3EQ6PEY2 450 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 SYT10Q6XYQ8 523 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 SLCO4C1Q6ZQN7 724 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 C3orf62Q6ZUJ4 267 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 MAATS1Q7Z4T9 603 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 CA13Q8N1Q1 262 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 SNX31Q8N9S9 440 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 CREB3L4Q8TEY5 395 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 SREK1Q8WXA9 508 aaKnown RBP10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 CDKL2Q92772 493 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 UTP23Q9BRU9 249 aaKnown RBP10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 TMEM79Q9BSE2 394 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 MCMBPQ9BTE3 642 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 SLC6A16Q9GZN6 736 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 DERL2Q9GZP9 239 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 RNF32Q9H0A6 362 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 TSPAN10Q9H1Z9 355 aaPredicted RBP10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 MMP25Q9NPA2 562 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 NECTIN3Q9NQS3 549 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 GRHL1Q9NZI5 618 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 WHRNQ9P202 907 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 ABI3Q9P2A4 366 aa10.61□□□□□ -0.71
NIPAL3-207ENST00000488155 TCRBV9S1A1TA0A576 114 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 NDC80O14777 642 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 WISP3O95389 354 aaPredicted RBP10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 CRYABP02511 175 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 SERPINA6P08185 405 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 SMIM10L1P0DMW3 83 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 RNH1P13489 461 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 CD1DP15813 335 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 STMN1P16949 149 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 GNAZP19086 355 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 HNRNPH1P31943 449 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 DCTP40126 519 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 HNMTP50135 292 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 PER3P56645 1201 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 TAS2R50P59544 299 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 GPX6P59796 221 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 RUNX2Q13950 521 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 OR4D1Q15615 310 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 OR1C1Q15619 314 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 ZNF468Q5VIY5 522 aaPredicted RBP10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 ADNP2Q6IQ32 1131 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 TMIGD1Q6UXZ0 262 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 RPS19BP1Q86WX3 136 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 GPSM1Q86YR5 675 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 PPM1NQ8N819 430 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 ANKRD7Q92527 254 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 MRRFQ96E11 262 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 TSPAN17Q96FV3 270 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 SMIM10Q96HG1 83 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 FAR2Q96K12 515 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 RBBP8Q99708 897 aa10.6□□□□□ -0.71
NIPAL3-207ENST00000488155 CPNE1Q99829 537 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms