RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	PANK4	Q9NVE7	773 aa		3.03	□□□□□ -1.92
TMEM50B-208	ENST00000474272	VPS18	Q9P253	973 aa		3.03	□□□□□ -1.92
TMEM50B-208	ENST00000474272	LEF1	Q9UJU2	399 aa	Predicted RBP	3.03	□□□□□ -1.92
TMEM50B-208	ENST00000474272	GMEB2	Q9UKD1	530 aa		3.03	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ELF5	Q9UKW6	265 aa	Predicted RBP	3.03	□□□□□ -1.92
TMEM50B-208	ENST00000474272	PA2G4	Q9UQ80	394 aa	Known RBP	3.03	□□□□□ -1.92
TMEM50B-208	ENST00000474272	COLEC10	Q9Y6Z7	277 aa		3.03	□□□□□ -1.92
TMEM50B-208	ENST00000474272	CC2D2A	Q9P2K1	1620 aa		3.03	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ARHGEF11	O15085	1522 aa		3.03	□□□□□ -1.92
TMEM50B-208	ENST00000474272	NCOA1	Q15788	1441 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ROCK2	O75116	1388 aa	Known RBP	3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CCDC7	Q96M83	1385 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SDR42E2	A6NKP2	422 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	C15orf61	A6NNL5	157 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	TTI1	O43156	1089 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ACSL4	O60488	711 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	GH1	P01241	217 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	GOT1	P17174	413 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ELAVL4	P26378	380 aa	Known RBP	3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SOX3	P41225	446 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SLC6A12	P48065	614 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ADAR	P55265	1226 aa	Known RBP	3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	C17orf67	Q0P5P2	114 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CDH18	Q13634	790 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	MTF1	Q14872	753 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ZNF542P	Q5EBM4	170 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	GLRA4	Q5JXX5	417 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	FIP1L1	Q6UN15	594 aa	Known RBP	3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ANKRD46	Q86W74	232 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CATSPERD	Q86XM0	798 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ZC3H3	Q8IXZ2	948 aa	Known RBP	3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	PRSS35	Q8N3Z0	413 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	NXPE2	Q96DL1	559 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	MAGED4	Q96JG8	741 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	RASL10B	Q96S79	203 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	PRMT1	Q99873	361 aa	Known RBP	3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	RBM4B	Q9BQ04	359 aa	Known RBP	3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CLEC7A	Q9BXN2	247 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	NYX	Q9GZU5	481 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	C10orf88	Q9H8K7	445 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	MRPL17	Q9NRX2	175 aa	Known RBP	3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	KLHL8	Q9P2G9	620 aa	Predicted RBP	3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SLC12A6	Q9UHW9	1150 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	FBXL5	Q9UKA1	691 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	FBXL4	Q9UKA2	621 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	PPP1R3C	Q9UQK1	317 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	DNMBP	Q6XZF7	1577 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	THOC2	Q8NI27	1593 aa	Known RBP	3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	TOPBP1	Q92547	1522 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	COL5A2	P05997	1499 aa	Predicted RBP	3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	POLA1	P09884	1462 aa	Predicted RBP	3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	GRIN2B	Q13224	1484 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	GAPVD1	Q14C86	1478 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	NCOA2	Q15596	1464 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SNAPC4	Q5SXM2	1469 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	FHOD3	Q2V2M9	1422 aa		3.02	□□□□□ -1.93
TMEM50B-208	ENST00000474272	PFAS	O15067	1338 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ARID2	Q68CP9	1835 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272		A0A0A6YYC8	382 aa	Predicted RBP	3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	GLTPD2	A6NH11	291 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ANKDD1B	A6NHY2	528 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272		I3L1I5	382 aa	Predicted RBP	3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	RTCA	O00442	366 aa	Known RBP	3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	PGRMC2	O15173	223 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	MLNR	O43193	412 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	KIF5C	O60282	957 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	MAGEC1	O60732	1142 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CYTIP	O60759	359 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SAP30	O75446	220 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	GLCE	O94923	617 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SRD5A2	P31213	254 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	MAGEB1	P43366	347 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SGCG	Q13326	291 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	RCN2	Q14257	317 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	DUSP5	Q16690	384 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	KBTBD12	Q3ZCT8	623 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	PM20D1	Q6GTS8	502 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	IYD	Q6PHW0	289 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	DHRS11	Q6UWP2	260 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SIGLEC15	Q6ZMC9	328 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	COX8C	Q7Z4L0	72 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CCDC83	Q8IWF9	413 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CLYBL	Q8N0X4	340 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	TCEANC	Q8N8B7	351 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	OR6S1	Q8NH40	331 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	MAPK15	Q8TD08	544 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CKAP2	Q8WWK9	683 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ARHGAP45	Q92619	1136 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	PANX3	Q96QZ0	392 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ZNF300	Q96RE9	604 aa	Predicted RBP	3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ZNF559	Q9BR84	538 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	MCRIP2	Q9BUT9	160 aa	Known RBP	3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	GPR173	Q9NS66	373 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	EXOC1	Q9NV70	894 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	HACD3	Q9P035	362 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ASIC3	Q9UHC3	531 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	NUDC	Q9Y266	331 aa		3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	EXOG	Q9Y2C4	368 aa	Known RBP	3.01	□□□□□ -1.93
TMEM50B-208	ENST00000474272	PCDHGA1	Q9Y5H4	931 aa		3.01	□□□□□ -1.93

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