RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 FAM86C2PA6NEL3 165 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 ZNF195O14628 629 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 NDUFB5O43674 189 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 RFPL2O75678 378 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 RASGRP1O95267 797 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 IL3P08700 152 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 CELP19835 753 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 GADD45AP24522 165 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 SDC2P34741 201 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 RORCP51449 518 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 SNAP47Q5SQN1 464 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 C10orf62Q5T681 223 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 ANKRD34AQ69YU3 496 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 NIPAL1Q6NVV3 410 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 ALKAL1Q6UXT8 129 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 RNF111Q6ZNA4 994 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 SHFQ7M4L6 423 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 LHFPL3Q86UP9 236 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 DCP2Q8IU60 420 aaKnown RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 CNTN4Q8IWV2 1026 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 NAGSQ8N159 534 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 GPR26Q8NDV2 337 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 OR6K6Q8NGW6 343 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 OR2T11Q8NH01 316 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 HUS1BQ8NHY5 278 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 C2orf15Q8WU43 125 aaKnown RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 FOXJ1Q92949 421 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 NT5C3BQ969T7 300 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 DNAJA3Q96EY1 480 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 MGME1Q9BQP7 344 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 CHIAQ9BZP6 476 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 TUBB1Q9H4B7 451 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 KCNK12Q9HB15 430 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 PLAC1Q9HBJ0 212 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 RABL2AQ9UBK7 228 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 SLC27A6Q9Y2P4 619 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 HCN4Q9Y3Q4 1203 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 TPRP12270 2363 aaKnown RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 E7EQ34 232 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 M0QZQ0 153 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 LEFTY2O00292 366 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 CACNB4O00305 520 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 CCRL2O00421 344 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 PENKP01210 267 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 SMIM18P0DKX4 95 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 ADRA1AP35348 466 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 CTSOP43234 321 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 CLDN8P56748 225 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 MC1RQ01726 317 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 MVKQ03426 396 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 ZNF763Q0D2J5 394 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 HYAL2Q12891 473 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 SEMA3BQ13214 749 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 CDK5R2Q13319 367 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 PPIGQ13427 754 aaKnown RBP eCLIP8.75□□□□□ -1.011e-8■■■□□ 15.2
HPS4-208ENST00000464362 ZNHIT3Q15649 155 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 UGT8Q16880 541 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 FAM46CQ5VWP2 391 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 HLA-DQA1Q5Y7H0 255 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 CCBE1Q6UXH8 406 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 VITQ6UXI7 678 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 Q6ZSR9 355 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 GRASPQ7Z6J2 395 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 OXR1Q8N573 874 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 PIGXQ8TBF5 258 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 PEX13Q92968 403 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 IGSF21Q96ID5 467 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 WACQ9BTA9 647 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 UCK2Q9BZX2 261 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 RNF38Q9H0F5 515 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 CSNK1G1Q9HCP0 422 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 TDP1Q9NUW8 608 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 RNF186Q9NXI6 227 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 SRRDQ9UH36 339 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 SNX7Q9UNH6 387 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 RPL36Q9Y3U8 105 aaKnown RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 PRAMEF33A0A0G2JMD5 474 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 C2orf92A0A1B0GVN3 265 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 ZNF860A6NHJ4 632 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 TMX2-CTNND1H3BSU7 103 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 PRAMEF10O60809 474 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 FKTNO75072 461 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 KHDRBS3O75525 346 aaKnown RBP8.74□□□□□ -1.01
HPS4-208ENST00000464362 DHFRP00374 187 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 HOXB6P17509 224 aaKnown RBP8.74□□□□□ -1.01
HPS4-208ENST00000464362 PTPN2P17706 415 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 ZNF10P21506 573 aaPredicted RBP8.74□□□□□ -1.01
HPS4-208ENST00000464362 CRISP3P54108 245 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 NFE2L1Q14494 772 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 AKIRIN2Q53H80 203 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SPIN4Q56A73 249 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 LCN1P1Q5VSP4 162 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 HMBOX1Q6NT76 420 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SHQ1Q6PI26 577 aaKnown RBP8.74□□□□□ -1.01
HPS4-208ENST00000464362 ZNF517Q6ZMY9 492 aaPredicted RBP8.74□□□□□ -1.01
HPS4-208ENST00000464362 TMEM25Q86YD3 366 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 RHBDF1Q96CC6 855 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 TMCO6Q96DC7 493 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 NUS1Q96E22 293 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms