RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 NIP7Q9Y221 180 aaKnown RBP eCLIP4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 RNF115Q9Y4L5 304 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 WDR19Q8NEZ3 1342 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 A0A0G2JNG1 304 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 ATP6AP2A0A1C7CYW4 349 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 ZNF716A6NP11 495 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 LACTBL1A8MY62 500 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 E9PBE3 544 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 H0YIV9 168 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 MID1O15344 667 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 NARSO43776 548 aaKnown RBP4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 CACNG3O60359 315 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 SNNO75324 88 aaPredicted RBP4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 PROP1O75360 226 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 RHBDL1O75783 438 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 GRAP2O75791 330 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 KIAA0754O94854 1291 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 APOHP02749 345 aaPredicted RBP4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 TFAP2AP05549 437 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 CAPN1P07384 714 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 ZNF735P0CB33 412 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 ANPEPP15144 967 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 POLR2CP19387 275 aaPredicted RBP4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 GALP22466 123 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 STIP1P31948 543 aaKnown RBP4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 NR2C2P49116 596 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 PROK1P58294 105 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 GABPAQ06546 454 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 KIR2DS5Q14953 304 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 PDK3Q15120 406 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 NIPAL3Q6P499 406 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 COX8CQ7Z4L0 72 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 PIP4P1Q86T03 277 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 SLC22A16Q86VW1 577 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 RNF113BQ8IZP6 322 aaKnown RBP4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 SLC43A2Q8N370 569 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 BBS5Q8N3I7 341 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 RBMXL3Q8N7X1 1067 aaKnown RBP4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 GRHL3Q8TE85 626 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 FBXO32Q969P5 355 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 OXNAD1Q96HP4 312 aaPredicted RBP4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 TXNDC15Q96J42 360 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 SENP8Q96LD8 212 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 CASD1Q96PB1 797 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 TESK2Q96S53 571 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 TBC1D10AQ9BXI6 508 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 PLAC1Q9HBJ0 212 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 HPS4Q9NQG7 708 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 SLC38A7Q9NVC3 462 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 HYPKQ9NX55 129 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 HOXC10Q9NYD6 342 aa4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.82□□□□□ -1.64
TM9SF3-202ENST00000443638 CUX2O14529 1486 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 RAD54L2Q9Y4B4 1467 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 PDS5AQ29RF7 1337 aaKnown RBP4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 TMEM272A0A1B0GTI8 110 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 SMIM35A0A1B0GVV1 85 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 MBLAC1A4D2B0 266 aaPredicted RBP4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 FAM47DPA6NHR8 397 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 ASB14A6NK59 587 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 SRRM4A7MD48 611 aaKnown RBP4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 E5RGE8 158 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 E5RJQ4 531 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 OVOL3O00110 214 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 OGTO15294 1046 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 SPRY3O43610 288 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 B4GALT2O60909 372 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 NDUFB8O95169 186 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 TXNDC12O95881 172 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 CYP1A2P05177 515 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 UGT2B4P06133 528 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 CA3P07451 260 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 YES1P07947 543 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 CKMT2P17540 419 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 GJB2P29033 226 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 TRIM23P36406 574 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 PTGFRP43088 359 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 AMTP48728 403 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 AIF1P55008 147 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 VCPP55072 806 aaKnown RBP4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 CLDN17P56750 224 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 KCNK10P57789 538 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 ISL1P61371 349 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 TRAP1Q12931 704 aaKnown RBP4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 DHX34Q14147 1143 aaKnown RBP4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 SPHARQ15513 63 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 TMEM35AQ53FP2 167 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 ZNF542PQ5EBM4 170 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 IGFL4Q6B9Z1 124 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 ASPHD2Q6ICH7 369 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 TRNP1Q6NT89 227 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 GFRALQ6UXV0 394 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 CEACAM20Q6UY09 585 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 ASB18Q6ZVZ8 466 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 ZNF627Q7L945 461 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 ZNF444Q8N0Y2 327 aaPredicted RBP4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 AGR3Q8TD06 166 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 PHYHIPQ92561 330 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 CASP10Q92851 521 aa4.81□□□□□ -1.64
TM9SF3-202ENST00000443638 BTBD9Q96Q07 612 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms