RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 CEP128Q6ZU80 1094 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 CYS1Q717R9 158 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 CCDC91Q7Z6B0 441 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 THOC6Q86W42 341 aaKnown RBP7.31□□□□□ -1.24
CD44-211ENST00000442151 GPALPP1Q8IXQ4 340 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 KLHL7Q8IXQ5 586 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 AFAP1L2Q8N4X5 818 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 PYROXD1Q8WU10 500 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 KIAA1191Q96A73 305 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 MAGED4Q96JG8 741 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 DEFB126Q9BYW3 111 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 DDX47Q9H0S4 455 aaKnown RBP7.31□□□□□ -1.24
CD44-211ENST00000442151 HCN3Q9P1Z3 774 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 TEX264Q9Y6I9 313 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 FER1L5A0AVI2 2057 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 CCDC189A1A4V9 331 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 KRT87PA6NCN2 255 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 EFCAB8A8MWE9 144 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 CCL21O00585 134 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 NRP2O60462 931 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 RDH16O75452 317 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 UNC5CO95185 931 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 SP1P08047 785 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 PTGER4P35408 488 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 CA7P43166 264 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 CYB561P49447 251 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 CLCN2P51788 898 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 ITGA8P53708 1063 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 RHAGQ02094 409 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 TUBA3CQ13748 450 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 TERF2Q15554 542 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 OR1C1Q15619 314 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 SULT1C3Q6IMI6 304 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 TUBA3EQ6PEY2 450 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 FJX1Q86VR8 437 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 KLHDC8AQ8IYD2 350 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 TMEM132CQ8N3T6 1108 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 DTWD1Q8N5C7 304 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 KCT2Q8NC54 265 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 OLFM1Q99784 485 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 RHOJQ9H4E5 214 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 CDCP1Q9H5V8 836 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 GRPEL1Q9HAV7 217 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 TRMT1Q9NXH9 659 aaKnown RBP7.31□□□□□ -1.24
CD44-211ENST00000442151 ADGRE2Q9UHX3 823 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 CHMP2BQ9UQN3 213 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 KLF13Q9Y2Y9 288 aaPredicted RBP7.31□□□□□ -1.24
CD44-211ENST00000442151 CSAG2Q9Y5P2 127 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 RELNP78509 3460 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 NBPF19A0A087WUL8 3843 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 FAM95CA0A1B0GW59 222 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 GABRR3A8MPY1 467 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 PRSS44E7EML9 344 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 PRRG2O14669 202 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 FFAR3O14843 346 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 GPR42O15529 346 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 DYRK3O43781 588 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 B3GALT2O43825 422 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 B4GALT2O60909 372 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 CLEC3AO75596 197 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 CLDN1O95832 211 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 ZNF888P0CJ79 500 aaPredicted RBP7.3□□□□□ -1.24
CD44-211ENST00000442151 SAT1P21673 171 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 GABRB3P28472 473 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 SERPINB1P30740 379 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 HSD17B7P56937 341 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 REEP5Q00765 189 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 TBL3Q12788 808 aaKnown RBP7.3□□□□□ -1.24
CD44-211ENST00000442151 PDIA2Q13087 525 aaKnown RBP7.3□□□□□ -1.24
CD44-211ENST00000442151 EFTUD2Q15029 972 aaKnown RBP eCLIP7.3□□□□□ -1.24
CD44-211ENST00000442151 DEFB134Q4QY38 66 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 RBM20Q5T481 1227 aaKnown RBP7.3□□□□□ -1.24
CD44-211ENST00000442151 TMEM211Q6ICI0 200 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 TRIM40Q6P9F5 258 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 TMIGD1Q6UXZ0 262 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 CRLF3Q8IUI8 442 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 ZNF595Q8IYB9 648 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 BEST3Q8N1M1 668 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 GHDCQ8N2G8 530 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 ZNF740Q8NDX6 193 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 UTP15Q8TED0 518 aaKnown RBP7.3□□□□□ -1.24
CD44-211ENST00000442151 GAL3ST3Q96A11 431 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 PYCR2Q96C36 320 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 SCMH1Q96GD3 660 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 GPR137Q96N19 417 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 KRT12Q99456 494 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 CPNE1Q99829 537 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 CENPKQ9BS16 269 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 EHD1Q9H4M9 534 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 COPS7BQ9H9Q2 264 aaPredicted RBP7.3□□□□□ -1.24
CD44-211ENST00000442151 MOCS1Q9NZB8 636 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 LRFN1Q9P244 771 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 SLC22A14Q9Y267 594 aa7.3□□□□□ -1.24
CD44-211ENST00000442151 DOCK10Q96BY6 2186 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 SAGE2PA6NJ88 616 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 USP27XA6NNY8 438 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 ZFAND5O76080 213 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 WDR47O94967 919 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 SEC31AO94979 1220 aaKnown RBP7.29□□□□□ -1.24
CD44-211ENST00000442151 SMIM10L1P0DMW3 83 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms