RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CBX5P45973 191 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 ARHGDIBP52566 201 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 CCL23P55773 120 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 KYAT1Q16773 422 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 GLYR1Q49A26 553 aaPredicted RBP7.19□□□□□ -1.26
CPSF6-202ENST00000435070 CNIH2Q6PI25 160 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 PAQR9Q6ZVX9 377 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF367Q7RTV3 350 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 PDZD3Q86UT5 571 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 STK40Q8N2I9 435 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 OR6M1Q8NGM8 313 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.19□□□□□ -1.262e-17■■■□□ 14.7
CPSF6-202ENST00000435070 PITX2Q99697 317 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 CPPED1Q9BRF8 314 aaPredicted RBP7.19□□□□□ -1.26
CPSF6-202ENST00000435070 NSUN3Q9H649 340 aaKnown RBP7.19□□□□□ -1.26
CPSF6-202ENST00000435070 COL14A1Q05707 1796 aaKnown RBP7.19□□□□□ -1.26
CPSF6-202ENST00000435070 AVPR1BP47901 424 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 CTBP2P56545 445 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 SPIBQ01892 262 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 RASSF6Q6ZTQ3 369 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 FAM92BQ6ZTR7 304 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 HS6ST3Q8IZP7 471 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 LINC00469Q8N7U9 141 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 FCRL2Q96LA5 508 aaPredicted RBP7.19□□□□□ -1.26
CPSF6-202ENST00000435070 AGO3Q9H9G7 860 aaKnown RBP7.19□□□□□ -1.26
CPSF6-202ENST00000435070 FANCFQ9NPI8 374 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 DLGAP4Q9Y2H0 992 aa7.19□□□□□ -1.26
CPSF6-202ENST00000435070 LDB2O43679 373 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 HPGDSO60760 199 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 MRPS14O60783 128 aaKnown RBP7.18□□□□□ -1.26
CPSF6-202ENST00000435070 ENGP17813 658 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 TPMTP51580 245 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 CRYZQ08257 329 aaKnown RBP7.18□□□□□ -1.26
CPSF6-202ENST00000435070 SPHARQ15513 63 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 MARC1Q5VT66 337 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 METTL7BQ6UX53 244 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 GOLGA7Q7Z5G4 137 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 RGL4Q8IZJ4 473 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 LGI4Q8N135 537 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 GHDCQ8N2G8 530 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 OR10Z1Q8NGY1 313 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 CRELD1Q96HD1 420 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 FOPNLQ96NB1 174 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 SLC2A13Q96QE2 648 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 MTIF3Q9H2K0 278 aaKnown RBP7.18□□□□□ -1.26
CPSF6-202ENST00000435070 LRTM1Q9HBL6 345 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 BPIFA1Q9NP55 256 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 MAPRE3Q9UPY8 281 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 PITPNM1O00562 1244 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 NCR1O76036 304 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 SOX14O95416 240 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 SCNN1AP37088 669 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 GNPDA1P46926 289 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 ABHD18Q0P651 414 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 FAM187BQ17R55 369 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 SLC39A12Q504Y0 691 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 ATG9BQ674R7 924 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 TIGD3Q6B0B8 471 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 SLC5A11Q8WWX8 675 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 PPP3R2Q96LZ3 170 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 PANX1Q96RD7 426 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 GMEB2Q9UKD1 530 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 NCKAP1Q9Y2A7 1128 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 MYBPHLA2RUH7 354 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 FAM220BPB1ANY3 271 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 FAM227AF5H4B4 570 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 CLIC1O00299 241 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 PAGE1O75459 146 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 RECQL4O94761 1208 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 HAPLN1P10915 354 aaPredicted RBP7.18□□□□□ -1.26
CPSF6-202ENST00000435070 EPB42P16452 691 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 MAGEA2P43356 314 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 ARHGEF7Q14155 803 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 GANABQ14697 944 aaKnown RBP7.18□□□□□ -1.26
CPSF6-202ENST00000435070 MOB2Q70IA6 237 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF655Q8N720 491 aaPredicted RBP7.18□□□□□ -1.26
CPSF6-202ENST00000435070 GPR152Q8TDT2 470 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 TSGA13Q96PP4 275 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 ANKRA2Q9H9E1 313 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 CYB5R1Q9UHQ9 305 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 TP53BP1Q12888 1972 aaPredicted RBP7.18□□□□□ -1.26
CPSF6-202ENST00000435070 LCHNA4D1U4 455 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 CBX4O00257 560 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 PI15O43692 258 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 CACNG3O60359 315 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 ULK1O75385 1050 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 CCNB2O95067 398 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 BCKDHAP12694 445 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 ACPPP15309 386 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 GTF2H2Q13888 395 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 TAF1CQ15572 869 aaPredicted RBP7.18□□□□□ -1.26
CPSF6-202ENST00000435070 GTF2H2CQ6P1K8 395 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 PIH1D2Q8WWB5 315 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 SEMA3CQ99985 751 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 SEC22CQ9BRL7 303 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 TMEM161AQ9NX61 479 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 SCN9AQ15858 1988 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 IL6P05231 212 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 CXCL3P19876 107 aa7.18□□□□□ -1.26
CPSF6-202ENST00000435070 CNR2P34972 360 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms