RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 SLMAPQ14BN4 828 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 ZKSCAN8Q15776 578 aaPredicted RBP17.3■□□□□ 0.36
PSPC1-202ENST00000427943 EXT1Q16394 746 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 NIPAL1Q6NVV3 410 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 CMC1Q7Z7K0 106 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 CRLF3Q8IUI8 442 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 BEST3Q8N1M1 668 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 BCORP1Q8N888 145 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 CCT6BQ92526 530 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 LPAR4Q99677 370 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 SLX1AQ9BQ83 275 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 PHACTR1Q9C0D0 580 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 STMN3Q9NZ72 180 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 TEKT2Q9UIF3 430 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 SLC5A6Q9Y289 635 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 ESYT3A0FGR9 886 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 MAN1A2O60476 641 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 DDAH2O95865 285 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 SERPINA6P08185 405 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 SMIM10L1P0DMW3 83 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 MAOAP21397 527 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 SPRP35270 261 aaPredicted RBP17.29■□□□□ 0.36
PSPC1-202ENST00000427943 MAGEA4P43358 317 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 RAB10P61026 200 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 ATP6V0D1P61421 351 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 SLC7A5Q01650 507 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 INAQ16352 499 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 ZNF572Q7Z3I7 529 aaPredicted RBP17.29■□□□□ 0.36
PSPC1-202ENST00000427943 CYP4X1Q8N118 509 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 TCAIMQ8N3R3 496 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 SNX31Q8N9S9 440 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 SUN3Q8TAQ9 357 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 M1APQ8TC57 530 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 FBF1Q8TES7 1133 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 SMIM10Q96HG1 83 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 C5orf34Q96MH7 638 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 PTCHD1Q96NR3 888 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 NPAS2Q99743 824 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 DNAJC11Q9NVH1 559 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 ANKRD10Q9NXR5 420 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 CD274Q9NZQ7 290 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 RNF112Q9ULX5 631 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 OSGIN2Q9Y236 505 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 DOPEY1Q5JWR5 2465 aa17.29■□□□□ 0.36
PSPC1-202ENST00000427943 FAM227AF5H4B4 570 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 PSMD12O00232 456 aaPredicted RBP17.28■□□□□ 0.36
PSPC1-202ENST00000427943 PRAMEF2O60811 474 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 H2AFYO75367 372 aaKnown RBP17.28■□□□□ 0.36
PSPC1-202ENST00000427943 RNH1P13489 461 aaKnown RBP17.28■□□□□ 0.36
PSPC1-202ENST00000427943 HNRNPH1P31943 449 aaKnown RBP17.28■□□□□ 0.36
PSPC1-202ENST00000427943 STX2P32856 288 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 SLC26A5P58743 744 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 BTN3A2P78410 334 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 ACER2Q5QJU3 275 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 GRTP1Q5TC63 336 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 ADNP2Q6IQ32 1131 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 H3F3CQ6NXT2 135 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 C8orf74Q6P047 294 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 TMIGD1Q6UXZ0 262 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 RAPH1Q70E73 1250 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 CYS1Q717R9 158 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 CA13Q8N1Q1 262 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 GAL3ST3Q96A11 431 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 ZNF354BQ96LW1 612 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 MMP25Q9NPA2 562 aa17.28■□□□□ 0.36
PSPC1-202ENST00000427943 CLGNO14967 610 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 ERI3O43414 337 aaKnown RBP17.27■□□□□ 0.36
PSPC1-202ENST00000427943 CCNT2O60583 730 aaKnown RBP17.27■□□□□ 0.36
PSPC1-202ENST00000427943 PRMT3O60678 531 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 PRAMEF4O60810 478 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 STK16O75716 305 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 RASAL1O95294 804 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 S100BP04271 92 aaPredicted RBP17.27■□□□□ 0.36
PSPC1-202ENST00000427943 GGT5P36269 586 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 TDGF1P3P51864 188 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 STXBP1P61764 594 aaKnown RBP17.27■□□□□ 0.36
PSPC1-202ENST00000427943 PMP22Q01453 160 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 CKAP4Q07065 602 aaKnown RBP17.27■□□□□ 0.36
PSPC1-202ENST00000427943 DLG1Q12959 904 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 MEP1AQ16819 746 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 PRAMEF9Q5VWM5 478 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 ZNF324BQ6AW86 544 aaPredicted RBP17.27■□□□□ 0.36
PSPC1-202ENST00000427943 SULT1C3Q6IMI6 304 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 QSOX2Q6ZRP7 698 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 KRT78Q8N1N4 520 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 KIF2BQ8N4N8 673 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 PDPRQ8NCN5 879 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 NR4A3Q92570 626 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 KIAA1191Q96A73 305 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 UBXN10Q96LJ8 280 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 C16orf45Q96MC5 204 aaPredicted RBP17.27■□□□□ 0.36
PSPC1-202ENST00000427943 ALG9Q9H6U8 611 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 CNOT10Q9H9A5 744 aaKnown RBP17.27■□□□□ 0.36
PSPC1-202ENST00000427943 NECTIN3Q9NQS3 549 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 GPRC5BQ9NZH0 403 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 ABI3Q9P2A4 366 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 ASB1Q9Y576 335 aa17.27■□□□□ 0.36
PSPC1-202ENST00000427943 A8MUA0 341 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 CLDN1O95832 211 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 SLC35E2BP0CK96 405 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms