RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 C1QCP02747 245 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 RB1P06400 928 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 NUDT7P0C024 238 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 HLA-EP13747 358 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 ATP1B2P14415 290 aaPredicted RBP14.62□□□□□ -0.07
C9orf3-204ENST00000424143 DDX5P17844 614 aaKnown RBP14.62□□□□□ -0.07
C9orf3-204ENST00000424143 CD22P20273 847 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 TIA1P31483 386 aaKnown RBP eCLIP14.62□□□□□ -0.07
C9orf3-204ENST00000424143 TNFSF8P32971 234 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 CSTF2P33240 577 aaKnown RBP eCLIP14.62□□□□□ -0.071e-6■■□□□ 12.7
C9orf3-204ENST00000424143 SPIBQ01892 262 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 CDH18Q13634 790 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 LRRC26Q2I0M4 334 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 EXOC3L2Q2M3D2 409 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 ATP13A5Q4VNC0 1218 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 FRMPD2BQ6IN97 320 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 TRIM40Q6P9F5 258 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 GALNT10Q86SR1 603 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 THOC6Q86W42 341 aaKnown RBP14.62□□□□□ -0.07
C9orf3-204ENST00000424143 RAB43Q86YS6 212 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 FAM46DQ8NEK8 389 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 OR2AP1Q8NGE2 309 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 CAPSLQ8WWF8 208 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 ASZ1Q8WWH4 475 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 KIAA1143Q96AT1 154 aaPredicted RBP14.62□□□□□ -0.07
C9orf3-204ENST00000424143 VOPP1Q96AW1 172 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 TIFAQ96CG3 184 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 REPS1Q96D71 796 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 WDR34Q96EX3 536 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 TRAF4Q9BUZ4 470 aaPredicted RBP14.62□□□□□ -0.07
C9orf3-204ENST00000424143 EBPLQ9BY08 206 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 TMEM245Q9H330 911 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 REEP4Q9H6H4 257 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 NMRK2Q9NPI5 230 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 TBC1D24Q9ULP9 559 aa14.62□□□□□ -0.07
C9orf3-204ENST00000424143 NPIPB15A6NHN6 443 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-204ENST00000424143 FOXE1O00358 373 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-204ENST00000424143 SMAD6O43541 496 aaKnown RBP14.61□□□□□ -0.07
C9orf3-204ENST00000424143 ABLIM3O94929 683 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 KRT75O95678 551 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 ADAP00813 363 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 ANXA4P09525 319 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-204ENST00000424143 CRISP1P54107 249 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 DCDC1P59894 354 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 SNRPD1P62314 119 aaKnown RBP14.61□□□□□ -0.07
C9orf3-204ENST00000424143 PTSQ03393 145 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 ILKQ13418 452 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 GAB1Q13480 694 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 SCARB2Q14108 478 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 DOC2AQ14183 400 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 XKR6Q5GH73 641 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 SLC25A30Q5SVS4 291 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 Q6ZPB1 254 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-204ENST00000424143 OR56A3Q8NH54 315 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 GPBP1L1Q9HC44 474 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-204ENST00000424143 COL4A6Q14031 1691 aa14.61□□□□□ -0.07
C9orf3-204ENST00000424143 MGAT4DA6NG13 374 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 K7ERQ8 282 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 PCDH7O60245 1069 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 GPR37L1O60883 481 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 GPX5O75715 221 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 PARNO95453 639 aaKnown RBP14.6□□□□□ -0.07
C9orf3-204ENST00000424143 ARAFP10398 606 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 TCEA1P23193 301 aaKnown RBP14.6□□□□□ -0.07
C9orf3-204ENST00000424143 NR4A2P43354 598 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 IDH2P48735 452 aaKnown RBP14.6□□□□□ -0.07
C9orf3-204ENST00000424143 SPINT3P49223 89 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 RORCP51449 518 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 ASAH1Q13510 395 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 PTGES3Q15185 160 aaKnown RBP14.6□□□□□ -0.07
C9orf3-204ENST00000424143 SSX1Q16384 188 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 TSTQ16762 297 aaKnown RBP14.6□□□□□ -0.07
C9orf3-204ENST00000424143 ATAD3CQ5T2N8 411 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 ZNF770Q6IQ21 691 aaPredicted RBP14.6□□□□□ -0.07
C9orf3-204ENST00000424143 LIX1LQ8IVB5 337 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 NLGN4XQ8N0W4 816 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 CELF2-AS1Q8N7Q2 184 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 SLC43A3Q8NBI5 491 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 FBXO15Q8NCQ5 510 aaPredicted RBP14.6□□□□□ -0.07
C9orf3-204ENST00000424143 OR4A15Q8NGL6 344 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 FIBINQ8TAL6 211 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 ASIC4Q96FT7 647 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 OPALINQ96PE5 141 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 GDF15Q99988 308 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 NIPSNAP1Q9BPW8 284 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 TM6SF2Q9BZW4 377 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 SUV39H2Q9H5I1 410 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 SLA2Q9H6Q3 261 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 RLIMQ9NVW2 624 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 GPATCH2Q9NW75 528 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 STUB1Q9UNE7 303 aa14.6□□□□□ -0.07
C9orf3-204ENST00000424143 ANKRD34BA5PLL1 514 aa14.59□□□□□ -0.07
C9orf3-204ENST00000424143 CENPXA8MT69 81 aa14.59□□□□□ -0.07
C9orf3-204ENST00000424143 FADS2P1A8MWK0 482 aa14.59□□□□□ -0.07
C9orf3-204ENST00000424143 ZNF670-ZNF695F2Z2N8 137 aa14.59□□□□□ -0.07
C9orf3-204ENST00000424143 SEMA3DO95025 777 aa14.59□□□□□ -0.07
C9orf3-204ENST00000424143 CELF2O95319 508 aaKnown RBP14.59□□□□□ -0.07
C9orf3-204ENST00000424143 ITPKAP23677 461 aa14.59□□□□□ -0.07
C9orf3-204ENST00000424143 CDH12P55289 794 aa14.59□□□□□ -0.07
C9orf3-204ENST00000424143 SMAD3P84022 425 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms