RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 HMGA1P17096 107 aaKnown RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 MAPK1P28482 360 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 MANFP55145 182 aaKnown RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 RAB8AP61006 207 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 SCARB2Q14108 478 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 ZC3H12BQ5HYM0 836 aaKnown RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 DDI2Q5TDH0 399 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 FKBP10Q96AY3 582 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 ISG20Q96AZ6 181 aaKnown RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 DNAJA3Q96EY1 480 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 DUS3LQ96G46 650 aaKnown RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 TBC1D17Q9HA65 648 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 IL1RAPQ9NPH3 570 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 ZDHHC3Q9NYG2 299 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 TMEM9Q9P0T7 183 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 ARNTLO00327 626 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 NRG2O14511 850 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 AMD1P17707 334 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 CD22P20273 847 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 NNMTP40261 264 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 RUNX1T1Q06455 604 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 RING1Q06587 406 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 TARDBPQ13148 414 aaKnown RBP eCLIP12.69□□□□□ -0.383e-13■■■■■ 42.2
TNFRSF8-203ENST00000417814 TOP3AQ13472 1001 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 VASH1Q7L8A9 365 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 CYP4Z2PQ8N1L4 340 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 DEPDC4Q8N2C3 294 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 NLGN4YQ8NFZ3 816 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 GGHQ92820 318 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 TP63Q9H3D4 680 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 XKR8Q9H6D3 395 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 GORASP2Q9H8Y8 452 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 GIMAP4Q9NUV9 329 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 COQ3Q9NZJ6 369 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 KCNE2Q9Y6J6 123 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 SLC22A1O15245 554 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 JRKO75564 520 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 CLEC2LP0C7M8 214 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 PIK3CBP42338 1070 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 SP3Q02447 781 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 PIN1Q13526 163 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 HIST2H2ACQ16777 129 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 FAM131AQ6UXB0 335 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 GLCCI1Q86VQ1 547 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 OR5D16Q8NGK9 328 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 OR6Q1Q8NGQ2 317 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 ASZ1Q8WWH4 475 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 BEX1Q9HBH7 125 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 TMCC3Q9ULS5 477 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 HCFC2Q9Y5Z7 792 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 CLCA3PQ9Y6N3 262 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 IDH3BO43837 385 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 CPNE6O95741 557 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 PRPS1L1P21108 318 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 SLC5A12Q1EHB4 618 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 MTFR2Q6P444 385 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 NPAS4Q8IUM7 802 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 GLB1L3Q8NCI6 653 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 B3GNT7Q8NFL0 401 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 COL21A1Q96P44 957 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 ARPC5LQ9BPX5 153 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 POLR2J2Q9GZM3 115 aaKnown RBP12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 CERS4Q9HA82 394 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 DKK3Q9UBP4 350 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 PCDHGA3Q9Y5H0 932 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 SCN3AQ9NY46 2000 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 TRAV19A0A0A6YYK7 116 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 GAPDHSO14556 408 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 PSIP1O75475 530 aaKnown RBP12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 C9P02748 559 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 CATP04040 527 aaKnown RBP12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 ELFN1P0C7U0 828 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 SRCP12931 536 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 PSMB5P28074 263 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 CLCN4P51793 760 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 SLC35A2P78381 396 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 BCL7AQ4VC05 210 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 ZNF385BQ569K4 471 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 RRM2BQ7LG56 351 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 ZZZ3Q8IYH5 903 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 CLP1Q92989 425 aaKnown RBP12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 UCN3Q969E3 161 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 CEP295NLQ96MC4 621 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 RHBGQ9H310 441 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 TM9SF3Q9HD45 589 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 SPG21Q9NZD8 308 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 SLC25A13Q9UJS0 675 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 SH2B3Q9UQQ2 575 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 UGT2A1Q9Y4X1 527 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 SGTAO43765 313 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 INHAP05111 366 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 CD6P30203 668 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 MAGEA11P43364 429 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 DUSP7Q16829 419 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 PYDC2Q56P42 97 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 COQ5Q5HYK3 327 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 LY6G5CQ5SRR4 150 aa12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 SHQ1Q6PI26 577 aaKnown RBP12.68□□□□□ -0.38
TNFRSF8-203ENST00000417814 SMARCD3Q6STE5 483 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms