RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 KANK2Q63ZY3 851 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ABHD17CQ6PCB6 329 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SCIMPQ6UWF3 145 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZNF793Q6ZN11 406 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CACNA2D3Q8IZS8 1091 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ESX1Q8N693 406 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 OR5T3Q8NGG3 340 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 METTL6Q8TCB7 284 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CT55Q8WUE5 264 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 REPS1Q96D71 796 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MVB12AQ96EY5 273 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MAGEB10Q96LZ2 347 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SORBS1Q9BX66 1292 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 NLNQ9BYT8 704 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ACPTQ9BZG2 426 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 REXO4Q9GZR2 422 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ELOVL6Q9H5J4 265 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MED4Q9NPJ6 270 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PRDM7Q9NQW5 492 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TXLNGQ9NUQ3 528 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PSD3Q9NYI0 1048 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 NDOR1Q9UHB4 597 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ADGRE2Q9UHX3 823 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZDHHC2Q9UIJ5 367 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 HAO1Q9UJM8 370 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CROTQ9UKG9 612 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SNX6Q9UNH7 406 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 NAALAD2Q9Y3Q0 740 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CCL27Q9Y4X3 112 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZFHX4Q86UP3 3567 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ACACAQ13085 2346 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CCDC88CQ9P219 2028 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SERTM1A2A2V5 107 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 AZIN1O14977 448 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ERI3O43414 337 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RDH16O75452 317 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 JUNP05412 331 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 FGF4P08620 206 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 UROSP10746 265 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 GRK2P25098 689 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 HMOX2P30519 316 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SLC1A6P48664 564 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 EFNA3P52797 238 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PLA2G16P53816 162 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 STXBP1P61764 594 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 DCDP81605 110 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MAT1AQ00266 395 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 OCRLQ01968 901 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ABHD18Q0P651 414 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TBL3Q12788 808 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 IFT88Q13099 833 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 STX3Q13277 289 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 DSG2Q14126 1118 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 NDUFA9Q16795 377 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SYT16Q17RD7 645 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SH2D4BQ5SQS7 431 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TTC19Q6DKK2 380 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MRPL14Q6P1L8 145 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PRMT9Q6P2P2 845 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 VASH2Q86V25 355 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PROSER1Q86XN7 944 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZNF781Q8N8C0 355 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 OR2L5Q8NG80 312 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PPP1R14CQ8TAE6 165 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 AGR3Q8TD06 166 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SELENOMQ8WWX9 145 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MR1Q95460 341 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MMABQ96EY8 250 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CMTM7Q96FZ5 175 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 NAF1Q96HR8 494 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 C17orf62Q9BQA9 187 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SLC7A5P2Q9GIP4 190 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CTSFQ9UBX1 484 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 IL17BQ9UHF5 180 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PADI1Q9ULC6 663 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RAXQ9Y2V3 346 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 DNAJC15Q9Y5T4 150 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PCSK5Q92824 1860 aa11.76□□□□□ -0.53
HLA-DQB1-203ENST00000399082 IGLV3-12A0A075B6K2 115 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 H0YIG0 161 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KLF11O14901 512 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 EFSO43281 561 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 EEDO75530 441 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SCELO95171 688 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KRT6AP02538 564 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KRT6BP04259 564 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KLK3P07288 261 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 LIFP15018 202 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 BSGP35613 385 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 EIF2S3P41091 472 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KRT6CP48668 564 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 OLR1P78380 273 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 BTN3A2P78410 334 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 HMGCS1Q01581 520 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CSTF3Q12996 717 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 DNASE1L3Q13609 305 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CUL3Q13618 768 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RUNX2Q13950 521 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 HERC3Q15034 1050 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TMEM35AQ53FP2 167 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 304.1 ms