RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SPIN1Q9Y657 262 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 ARAP2Q8WZ64 1704 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 FAM92AA1XBS5 289 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 ELOA3DA6NLF2 546 aaPredicted RBP13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 ARHGEF33A8MVX0 844 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 KHDRBS3O75525 346 aaKnown RBP13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 RCBTB2O95199 551 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 CSTF2P33240 577 aaKnown RBP eCLIP13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 MNDAP41218 407 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 ELOA3BQ3SY89 546 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 CLEC12AQ5QGZ9 265 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 UNC5DQ6UXZ4 953 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 MSANTD1Q6ZTZ1 278 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 ELOA3Q8NG57 546 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 HUS1BQ8NHY5 278 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 RHBDF1Q96CC6 855 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 RNF38Q9H0F5 515 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 ELL3Q9HB65 397 aaPredicted RBP13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 TAS2R7Q9NYW3 318 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 PCDHGB7Q9Y5F8 929 aa13.71□□□□□ -0.22
PCDHGA11-201ENST00000398587 TOR1BO14657 336 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 SSNA1O43805 119 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 PLOD3O60568 738 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 CLIC3O95833 236 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 ADRB3P13945 408 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 ACADLP28330 430 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 MAGEA3P43357 314 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 NUDT6P53370 316 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 CST6Q15828 149 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 MARVELD2Q8N4S9 558 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 HHIPL1Q96JK4 782 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 MGAT4BQ9UQ53 548 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 NPC1O15118 1278 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 RNGTTO60942 597 aaKnown RBP13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 CHRM5P08912 532 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 POLR2CP19387 275 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 CAPN3P20807 821 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 ADRA1AP35348 466 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 TNFAIP8L3Q5GJ75 292 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 LETMD1Q6P1Q0 360 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 ZNF527Q8NB42 609 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 PIK3R3Q92569 461 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 GALNT8Q9NY28 637 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 CDH7Q9ULB5 785 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 GMFGO60234 142 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 RASAL1O95294 804 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 C5AR1P21730 350 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 RGRP47804 291 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 RAB25P57735 213 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 TUBA3CQ13748 450 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 LIN54Q6MZP7 749 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 GPR26Q8NDV2 337 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 OR4K14Q8NGD5 310 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 HDAC2Q92769 488 aaKnown RBP13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 MUS81Q96NY9 551 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 DOHHQ9BU89 302 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 KLHL42Q9P2K6 505 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 ITGB1BP2Q9UKP3 347 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 GLOD5A6NK44 160 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 SNAP29O95721 258 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 SLC16A8O95907 504 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 HPRP00739 348 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 EPCAMP16422 314 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 CSNK1DP48730 415 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 SEMA3BQ13214 749 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 LAPTM4AQ15012 233 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 OGFRL1Q5TC84 451 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 KLHL24Q6TFL4 600 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 ANKLE1Q8NAG6 615 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 ATP6V1C2Q8NEY4 427 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 SLC46A2Q9BY10 475 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 CPEB1Q9BZB8 566 aaKnown RBP13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 TBL1XR1Q9BZK7 514 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 ANKRA2Q9H9E1 313 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 TMEM138Q9NPI0 162 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 TRPV5Q9NQA5 729 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 HRASLS2Q9NWW9 162 aa13.7□□□□□ -0.22
PCDHGA11-201ENST00000398587 NME4O00746 187 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 AZGP1P25311 298 aaKnown RBP13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 FAUP35544 74 aaKnown RBP13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 ARFIP1P53367 373 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 C18orf21Q32NC0 220 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 KIAA1161Q6NSJ0 714 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 ZNF554Q86TJ5 538 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 GKN2Q86XP6 184 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 ANKFN1Q8N957 763 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 SNTG1Q9NSN8 517 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 MCUBQ9NWR8 336 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 HCSTQ9UBK5 93 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 DOCK2Q92608 1830 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 OR5K4A6NMS3 321 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 ATXN1LP0C7T5 689 aaKnown RBP13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 NTSR1P30989 418 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 ARCN1P48444 511 aaKnown RBP13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 KCNC1P48547 511 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 RAB15P59190 212 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 ADAM17P78536 824 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 ENPP2Q13822 863 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 RTL10Q7L3V2 364 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 NUP54Q7Z3B4 507 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms