RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ALPPP05187 535 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 HNF1BP35680 557 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 BNC1Q01954 994 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 MBTPS1Q14703 1052 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 PAMR1Q6UXH9 720 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 RNF165Q6ZSG1 346 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 UBE2R2Q712K3 238 aaPredicted RBP23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 VRK3Q8IV63 474 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 YIPF7Q8N8F6 280 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 DEDD2Q8WXF8 326 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 NECTIN4Q96NY8 510 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 MAGEB17A8MXT2 336 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 MEN1O00255 615 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 ARHGEF9O43307 516 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 SLC10A3P09131 477 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 CSKP41240 450 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 RORCP51449 518 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 NKX3-2P78367 333 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 PPIGQ13427 754 aaKnown RBP eCLIP23.06■■□□□ 1.284e-7■■□□□ 13
CSNK1E-203ENST00000396832 MADCAM1Q13477 382 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 ASAH1Q13510 395 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 LRRC66Q68CR7 880 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 NLRP8Q86W28 1048 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 OR10G2Q8NGC3 310 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 WDR36Q8NI36 951 aaKnown RBP23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 PIH1D2Q8WWB5 315 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 TESCQ96BS2 214 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 CDCA4Q9BXL8 241 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 RNF121Q9H920 327 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 ATP13A2Q9NQ11 1180 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 CD84Q9UIB8 345 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 GPX2P18283 190 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 PSPHP78330 225 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 UGT8Q16880 541 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 NOXRED1Q6NXP6 359 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 NIPSNAP1Q9BPW8 284 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 OGDHLQ9ULD0 1010 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 DPM1O60762 260 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 FHP07954 510 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 CCNYL3P0C7X3 344 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 LAMP1P11279 417 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 PRPS2P11908 318 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 FAM131AQ6UXB0 335 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 CERS6Q6ZMG9 384 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 FOXJ1Q92949 421 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 TTLL2Q9BWV7 592 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 TAPBPLQ9BX59 468 aa23.06■■□□□ 1.28
CSNK1E-203ENST00000396832 POLR1CO15160 346 aaPredicted RBP23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 M6PRP20645 277 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 CCR7P32248 378 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 CRYBA2P53672 197 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 TARDBPQ13148 414 aaKnown RBP eCLIP23.05■■□□□ 1.286e-13■■□□□ 12
CSNK1E-203ENST00000396832 DUOXA1Q1HG43 343 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 C5orf22Q49AR2 442 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 DPY19L3Q6ZPD9 716 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 SLC24A5Q71RS6 500 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 FAM217AQ8IXS0 508 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 APCDD1Q8J025 514 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 SLC32A1Q9H598 525 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 KCNN3Q9UGI6 736 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 SUV39H1O43463 412 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 AKR7A2O43488 359 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 ZDHHC11BP0C7U3 371 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 IFI30P13284 250 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 CBLP22681 906 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 PSMA3P25788 255 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 HOXC5Q00444 222 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 HOMEZQ8IX15 550 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 GPR26Q8NDV2 337 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 CMAHPQ9Y471 501 aa23.05■■□□□ 1.28
CSNK1E-203ENST00000396832 SNRPD2P62316 118 aaKnown RBP23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 RUNX1T1Q06455 604 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 GPR17Q13304 367 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 PLD1Q13393 1074 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 ARHGEF6Q15052 776 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 SLC35F1Q5T1Q4 408 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 TCTE3Q8IZS6 198 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 GPR156Q8NFN8 814 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 TMEM121BQ9BXQ6 578 aaPredicted RBP23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 GOLGA4Q13439 2230 aaKnown RBP23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 FZD6O60353 706 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 GZMKP49863 264 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 HECTD3Q5T447 861 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 ADGRF1Q5T601 910 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 TSEN54Q7Z6J9 526 aaKnown RBP23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 PLCZ1Q86YW0 608 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 GALNT6Q8NCL4 622 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 WDFY2Q96P53 400 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 OPALINQ96PE5 141 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 VPS35Q96QK1 796 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 UCK2Q9BZX2 261 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 TEKT2Q9UIF3 430 aa23.04■■□□□ 1.28
CSNK1E-203ENST00000396832 CSF3P09919 207 aa23.03■■□□□ 1.28
CSNK1E-203ENST00000396832 AMD1P17707 334 aa23.03■■□□□ 1.28
CSNK1E-203ENST00000396832 NUDT1P36639 197 aa23.03■■□□□ 1.28
CSNK1E-203ENST00000396832 SOX3P41225 446 aa23.03■■□□□ 1.28
CSNK1E-203ENST00000396832 KIR2DL3P43628 341 aa23.03■■□□□ 1.28
CSNK1E-203ENST00000396832 TEKQ02763 1124 aa23.03■■□□□ 1.28
CSNK1E-203ENST00000396832 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.03■■□□□ 1.28
CSNK1E-203ENST00000396832 CDH18Q13634 790 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms