RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 CYP17A1P05093 508 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 SRCP12931 536 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 CYP2A7P20853 494 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 MAGEA11P43364 429 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 CDH4P55283 916 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 RUNX1T1Q06455 604 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 MGAT3Q09327 533 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 ABRQ12979 859 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 IQCF1Q8N6M8 205 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 ST13P5Q8NFI4 369 aaPredicted RBP13.76□□□□□ -0.21
CLIP2-203ENST00000395060 JPH3Q8WXH2 748 aaPredicted RBP13.76□□□□□ -0.21
CLIP2-203ENST00000395060 PIK3R3Q92569 461 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 FATE1Q969F0 183 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 C11orf54Q9H0W9 315 aaPredicted RBP13.76□□□□□ -0.21
CLIP2-203ENST00000395060 PTPRDP23468 1912 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 HNRNPA0Q13151 305 aaKnown RBP13.75□□□□□ -0.21
CLIP2-203ENST00000395060 KRR1Q13601 381 aaKnown RBP13.75□□□□□ -0.21
CLIP2-203ENST00000395060 IQCCQ4KMZ1 466 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 C22orf42Q6IC83 251 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 NCEH1Q6PIU2 408 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 SYT14Q8NB59 555 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 GPR26Q8NDV2 337 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 CIDECQ96AQ7 238 aaPredicted RBP13.75□□□□□ -0.21
CLIP2-203ENST00000395060 DOHHQ9BU89 302 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 ANKHQ9HCJ1 492 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 TMEM45AQ9NWC5 275 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 CCDC59Q9P031 241 aaKnown RBP13.75□□□□□ -0.21
CLIP2-203ENST00000395060 CAPN5O15484 640 aaPredicted RBP13.75□□□□□ -0.21
CLIP2-203ENST00000395060 ADAM12O43184 909 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 SEPT4O43236 478 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 ANXA4P09525 319 aaPredicted RBP13.75□□□□□ -0.21
CLIP2-203ENST00000395060 ACRV1P26436 265 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 DBPQ10586 325 aaPredicted RBP13.75□□□□□ -0.21
CLIP2-203ENST00000395060 VEPH1Q14D04 833 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 RGNQ15493 299 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 CLLU1OSQ5K130 101 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 PDZK1Q5T2W1 519 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 CPTPQ5TA50 214 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 SNAPC3Q92966 411 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 TEKT2Q9UIF3 430 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 ANKRD36A6QL64 1941 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 UNC80Q8N2C7 3258 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 VCANP13611 3396 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 MTMR11A4FU01 709 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 C2orf78A6NCI8 922 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 MGAT4DA6NG13 374 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 OR2AG2A6NM03 316 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 E7EQ34 232 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 COCHO43405 550 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 CCNB2O95067 398 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 GASTP01350 101 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 TSPAN19P0C672 248 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 PSKH1P11801 424 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 HOXB9P17482 250 aaPredicted RBP13.75□□□□□ -0.21
CLIP2-203ENST00000395060 GPX2P18283 190 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 TYMPP19971 482 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 CD22P20273 847 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 PRPS1L1P21108 318 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 TTLL9Q3SXZ7 439 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 ATP13A5Q4VNC0 1218 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 RTN4RL1Q86UN2 441 aaPredicted RBP13.75□□□□□ -0.21
CLIP2-203ENST00000395060 NOXA1Q86UR1 476 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 TMCO6Q96DC7 493 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 POLR2J2Q9GZM3 115 aaKnown RBP13.75□□□□□ -0.21
CLIP2-203ENST00000395060 COMMD3Q9UBI1 195 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 DNMT3LQ9UJW3 386 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 CARD8Q9Y2G2 431 aa13.75□□□□□ -0.21
CLIP2-203ENST00000395060 C5orf42Q9H799 3197 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 PRAMEF33A0A0G2JMD5 474 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 A0A0X1KG70 313 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 C12orf71A8MTZ7 269 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 SCO2O43819 266 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 ICMTO60725 284 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 PRAMEF10O60809 474 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 SCN2BO60939 215 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 CDC42P60953 191 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 ALDH6A1Q02252 535 aaKnown RBP13.74□□□□□ -0.21
CLIP2-203ENST00000395060 ALG1LQ6GMV1 187 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 SHFQ7M4L6 423 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 TAS1R1Q7RTX1 841 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 MRPL10Q7Z7H8 261 aaKnown RBP13.74□□□□□ -0.21
CLIP2-203ENST00000395060 ATCAYQ86WG3 371 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 ELMOD2Q8IZ81 293 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 SUN5Q8TC36 379 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 MYLIPQ8WY64 445 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 CMTM7Q96FZ5 175 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 OPALINQ96PE5 141 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 PCDHB11Q9Y5F2 797 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 A0A0B4J293 547 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 A0A1W2PQL4 384 aaPredicted RBP13.74□□□□□ -0.21
CLIP2-203ENST00000395060 FABP12A6NFH5 140 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 TMEM229AB2RXF0 380 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 ADAMTS4O75173 837 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 SCO1O75880 301 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 C6orf47O95873 294 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 IGLV3-27P01718 113 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 SEMG1P04279 462 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 MYL9P24844 172 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 AOAHP28039 575 aa13.74□□□□□ -0.21
CLIP2-203ENST00000395060 CSKP41240 450 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms