RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 KRTAP12-3P60328 96 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 RPS8P62241 208 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 RBBP4Q09028 425 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 HSPB3Q12988 150 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CUL3Q13618 768 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 FASTKQ14296 549 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 KIR2DS1Q14954 304 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 SGCBQ16585 318 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CCL14Q16627 93 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 PCK2Q16822 640 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 KCTD19Q17RG1 926 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 VWC2Q2TAL6 325 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 TEX35Q5T0J7 233 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF658Q5TYW1 1059 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 LIPJQ5W064 366 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 HAUS3Q68CZ6 603 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ASPHD2Q6ICH7 369 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 PRSS55Q6UWB4 352 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 TFAP2EQ6VUC0 442 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 Q6ZVQ6 151 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 IL17RELQ6ZVW7 336 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CPEB2Q7Z5Q1 589 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 PIGWQ7Z7B1 504 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 APOBEC3FQ8IUX4 373 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 TBC1D10CQ8IV04 446 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CCDC71Q8IV32 467 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ERI1Q8IV48 349 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF595Q8IYB9 648 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 DND1Q8IYX4 353 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ADGRF2Q8IZF7 708 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF786Q8N393 782 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 RYBPQ8N488 228 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 C14orf178Q8N769 122 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF433Q8N7K0 673 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF491Q8N8L2 437 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 XXYLT1Q8NBI6 393 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ZNRF1Q8ND25 227 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF671Q8TAW3 534 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ADAMTS16Q8TE57 1224 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 SNRNP27Q8WVK2 155 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 SRSF12Q8WXF0 261 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 RFFLQ8WZ73 363 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 USP6NLQ92738 828 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 PROX1Q92786 737 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 JAKMIP2Q96AA8 810 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 NSUN4Q96CB9 384 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 FAF2Q96CS3 445 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 SPACA9Q96E40 222 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 PGM2Q96G03 612 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 RBM18Q96H35 190 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 VSIG2Q96IQ7 327 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CASD1Q96PB1 797 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 RCHY1Q96PM5 261 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 NDNQ99608 321 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 RSPO3Q9BXY4 272 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CCSER1Q9C0I3 900 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 NMUR2Q9GZQ4 415 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 SDCBP2Q9H190 292 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 MUC13Q9H3R2 512 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CUEDC2Q9H467 287 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 GOLPH3LQ9H4A5 285 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 OSGEPL1Q9H4B0 414 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 UBN1Q9NPG3 1134 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 SLC35C2Q9NQQ7 365 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF331Q9NQX6 463 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 GSN-AS1Q9NRJ2 163 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 SEPT11Q9NVA2 429 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 SPG21Q9NZD8 308 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 TXNDC16Q9P2K2 825 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 RCOR3Q9P2K3 495 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 SEC63Q9UGP8 760 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 KLHL21Q9UJP4 597 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF223Q9UK11 482 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 FBXL4Q9UKA2 621 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CPSF3Q9UKF6 684 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 PILRBQ9UKJ0 227 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 HBS1LQ9Y450 684 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 RPS6KL1Q9Y6S9 549 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 COLEC10Q9Y6Z7 277 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ITGB4P16144 1822 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 IL16Q14005 1332 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF644Q9H582 1327 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 KIF26AQ9ULI4 1882 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CHD4Q14839 1912 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 RAI1Q7Z5J4 1906 aaPredicted RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ARHGAP21Q5T5U3 1957 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 GPR75-ASB3A0A0A6YYF3 556 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 TRAV24A0A0B4J272 114 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 IGHV3-35A0A0C4DH35 117 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 A0A1W2PPK0 400 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 A0A1W2PPQ1 181 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 BCLAF3A2AJT9 711 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 OR2A25A4D2G3 310 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 EFCAB7A8K855 629 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 CDRT15L2A8MXV6 281 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 TMCO5BA8MYB1 307 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 PTGES3LE9PB15 166 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 H3BMM5 538 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ADAMDEC1O15204 470 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 PAPSS1O43252 624 aaPredicted RBP0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms