RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 HRH2P25021 359 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 SSTR4P31391 388 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 CNR2P34972 360 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 ARCN1P48444 511 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 RGS8P57771 180 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 PSMA6P60900 246 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 GINS1Q14691 196 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 PTCHD3Q3KNS1 767 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 ZNF311Q5JNZ3 666 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 KCTD11Q693B1 232 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 FAM220AQ7Z4H9 259 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 OR2T35Q8NGX2 323 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 KLRG1Q96E93 195 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 AMBRA1Q9C0C7 1298 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 ACTR6Q9GZN1 396 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 TRAV19A0A0A6YYK7 116 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 UBFD1O14562 309 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 ANKRD28O15084 1053 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 RP2O75695 350 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 ARHGEF15O94989 841 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 HMGN1P05114 100 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 LIPAP38571 399 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 PNLIPRP1P54315 467 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 SLC35A2P78381 396 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 DSG2Q14126 1118 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 CREB3L2Q70SY1 520 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 C14orf80Q86SX3 495 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 GALNT13Q8IUC8 556 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 FTMTQ8N4E7 242 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 C1orf216Q8TAB5 229 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 SGCDQ92629 289 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 ZC3H10Q96K80 434 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 CENPOQ9BU64 300 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 ELAC1Q9H777 363 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 CRTAC1Q9NQ79 661 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 EMC3Q9P0I2 261 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 CACNG4Q9UBN1 327 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 PCDHB11Q9Y5F2 797 aa8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 DNMT3AQ9Y6K1 912 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-201ENST00000377327 PCDH17O14917 1159 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 CAPN5O15484 640 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 STBD1O95210 358 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 H2AFB2P0C5Z0 115 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 KCNE1P15382 129 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 NAT1P18440 290 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 LHCGRP22888 699 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 HTR3AP46098 478 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 MRPS6P82932 125 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 SNTB2Q13425 540 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 GPR33Q49SQ1 333 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 CYP27C1Q4G0S4 372 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 TIGD5Q53EQ6 642 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 SIGIRRQ6IA17 410 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 CNIH2Q6PI25 160 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 TAF8Q7Z7C8 310 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 ZNF548Q8NEK5 533 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 PJA1Q8NG27 643 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 SLC35B4Q969S0 331 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 COL26A1Q96A83 441 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 RAD51AP1Q96B01 352 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 EXOSC8Q96B26 276 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 ATOH8Q96SQ7 321 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 BRINP2Q9C0B6 783 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 PCDHB16Q9NRJ7 776 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 ZFP37Q9Y6Q3 630 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 CPSF4LA6NMK7 179 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 ADM5C9JUS6 153 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 PRKYO43930 277 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 ECDO95905 644 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 PAHP00439 452 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 RPN2P04844 631 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 SOX3P41225 446 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 AP1S1P61966 158 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 PCDH1Q08174 1060 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 RBBP4Q09028 425 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 HSPB3Q12988 150 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 SF3A2Q15428 464 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 SWI5Q1ZZU3 235 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 DUSP28Q4G0W2 176 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 HAGHLQ6PII5 290 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 METTL3Q86U44 580 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 UMODL1-AS1Q8N2C9 162 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 C7orf57Q8NEG2 295 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 SNX33Q8WV41 574 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 NXPE2Q96DL1 559 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 ZSWIM3Q96MP5 696 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 CCDC115Q96NT0 180 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 TBX5Q99593 518 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 OR51V1Q9H2C8 321 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 BRD7Q9NPI1 651 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 ZFR2Q9UPR6 939 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 CACNA1SQ13698 1873 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 TEX13CA0A0J9YWL9 993 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 A0A1B0GVM2 712 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 NUPL2O15504 423 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 HOXC11O43248 304 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 SERPINA3P01011 423 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 KCNQ1P51787 676 aa8.74□□□□□ -1.01
CRNKL1-201ENST00000377327 AP1S2P56377 157 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms