RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PRAMEF14Q5SWL7 426 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 PRAMEF13Q5VWM6 474 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 ANKRD34AQ69YU3 496 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 PNCKQ6P2M8 343 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 ADAMTSL4Q6UY14 1074 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 ARMCX6Q7L4S7 300 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 R3HCC1LQ7Z5L2 792 aaKnown RBP11.59□□□□□ -0.55
HMGCL-202ENST00000374487 VTCN1Q7Z7D3 282 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 C11orf96Q7Z7L8 435 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 PDZD3Q86UT5 571 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 HORMAD1Q86X24 394 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 OR4K1Q8NGD4 311 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 OR5AR1Q8NGP9 310 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 TFGQ92734 400 aaPredicted RBP11.59□□□□□ -0.55
HMGCL-202ENST00000374487 TPD52L3Q96J77 140 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 IL17FQ96PD4 163 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 PHF12Q96QT6 1004 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 ACAT2Q9BWD1 397 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 SPATA9Q9BWV2 254 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 BHLHE41Q9C0J9 482 aaPredicted RBP11.59□□□□□ -0.55
HMGCL-202ENST00000374487 OR52A5Q9H2C5 316 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 CHRDQ9H2X0 955 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 ZNF282Q9UDV7 671 aaPredicted RBP11.59□□□□□ -0.55
HMGCL-202ENST00000374487 PLAGL1Q9UM63 463 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 ABCG2Q9UNQ0 655 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 PCDHGA8Q9Y5G5 932 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 CALRP27797 417 aaKnown RBP11.58□□□□□ -0.56
HMGCL-202ENST00000374487 PIGAP37287 484 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 RPL3P39023 403 aaKnown RBP11.58□□□□□ -0.56
HMGCL-202ENST00000374487 CRATP43155 626 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 IL1RL1Q01638 556 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 C2orf80Q0P641 193 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 RPA4Q13156 261 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 PMS2P3Q13401 168 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 RGNQ15493 299 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 RBM48Q5RL73 367 aaKnown RBP11.58□□□□□ -0.56
HMGCL-202ENST00000374487 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.58□□□□□ -0.56
HMGCL-202ENST00000374487 ZNF773Q6PK81 442 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 XKR5Q6UX68 686 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 TMIGD1Q6UXZ0 262 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.58□□□□□ -0.56
HMGCL-202ENST00000374487 EIF3MQ7L2H7 374 aaKnown RBP11.58□□□□□ -0.56
HMGCL-202ENST00000374487 LRRTM4Q86VH4 590 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 DCP2Q8IU60 420 aaKnown RBP11.58□□□□□ -0.56
HMGCL-202ENST00000374487 LRRC56Q8IYG6 542 aaPredicted RBP11.58□□□□□ -0.56
HMGCL-202ENST00000374487 KRT78Q8N1N4 520 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 PPCDCQ96CD2 204 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 ISOC1Q96CN7 298 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 HSH2DQ96JZ2 352 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 TM9SF3Q9HD45 589 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 THAP10Q9P2Z0 257 aaPredicted RBP11.58□□□□□ -0.56
HMGCL-202ENST00000374487 ATP6V1HQ9UI12 483 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 HCN4Q9Y3Q4 1203 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 R4GN57 208 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 C1orf226A1L170 272 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 DIRAS1O95057 198 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 RPN2P04844 631 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 KLK1P06870 262 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 IGFBP5P24593 272 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 PTX3P26022 381 aaPredicted RBP11.58□□□□□ -0.56
HMGCL-202ENST00000374487 AQP1P29972 269 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 PIK3CBP42338 1070 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 TAS2R50P59544 299 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 GAB1Q13480 694 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 RAB39AQ14964 217 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 CYP2A13Q16696 494 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 PIP5KL1Q5T9C9 394 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 BROXQ5VW32 411 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 EGFLAMQ63HQ2 1017 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 NUDT18Q6ZVK8 323 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 CBLL1Q75N03 491 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 GALNT5Q7Z7M9 940 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 DCUN1D3Q8IWE4 304 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 CHPFQ8IZ52 775 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 SYNPOQ8N3V7 929 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 C11orf65Q8NCR3 313 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 ZNF740Q8NDX6 193 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 WDR48Q8TAF3 677 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 ZFP90Q8TF47 636 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 HDAC2Q92769 488 aaKnown RBP11.58□□□□□ -0.56
HMGCL-202ENST00000374487 MAL2Q969L2 176 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 COX14Q96I36 57 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 LIN28AQ9H9Z2 209 aaKnown RBP11.58□□□□□ -0.56
HMGCL-202ENST00000374487 ADPRHL2Q9NX46 363 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 SIRT5Q9NXA8 310 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 SLC23A2Q9UGH3 650 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 BLOC1S6Q9UL45 172 aa11.58□□□□□ -0.56
HMGCL-202ENST00000374487 PCYT1BQ9Y5K3 369 aaPredicted RBP11.58□□□□□ -0.56
HMGCL-202ENST00000374487 MUC6Q6W4X9 2439 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 SUV39H1O43463 412 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 NUDT7P0C024 238 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 IL7RP16871 459 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 CRHBPP24387 322 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 DNAJA1P31689 397 aaKnown RBP11.57□□□□□ -0.56
HMGCL-202ENST00000374487 HBA1P69905 142 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 VLDLRP98155 873 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 CDK3Q00526 305 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 MC1RQ01726 317 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 SRSF5Q13243 272 aaKnown RBP11.57□□□□□ -0.56
HMGCL-202ENST00000374487 LAPTM4AQ15012 233 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms