RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 RHBDF1Q96CC6 855 aa13.39□□□□□ -0.27
UBXN11-207ENST00000374223 LRRC39Q96DD0 335 aa13.39□□□□□ -0.27
UBXN11-207ENST00000374223 VPS39Q96JC1 886 aa13.39□□□□□ -0.27
UBXN11-207ENST00000374223 CDCP1Q9H5V8 836 aa13.39□□□□□ -0.27
UBXN11-207ENST00000374223 SAYSD1Q9NPB0 183 aa13.39□□□□□ -0.27
UBXN11-207ENST00000374223 CLDN16Q9Y5I7 305 aa13.39□□□□□ -0.27
UBXN11-207ENST00000374223 CSMD2Q7Z408 3487 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 A0A1B0GUH1 482 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 MAGEB17A8MXT2 336 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 WDR47O94967 919 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 CD22P20273 847 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 GRK3P35626 688 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 SLC6A12P48065 614 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 OR4D2P58180 307 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 ACTN3Q08043 901 aaPredicted RBP13.38□□□□□ -0.27
UBXN11-207ENST00000374223 DLG1Q12959 904 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 PWP1Q13610 501 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 ZNF766Q5HY98 468 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 RNFT1Q5M7Z0 435 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 GFRALQ6UXV0 394 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 C16orf47Q6ZP98 133 aaPredicted RBP13.38□□□□□ -0.27
UBXN11-207ENST00000374223 SLCO4C1Q6ZQN7 724 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 CYP4X1Q8N118 509 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 CA13Q8N1Q1 262 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 NFAM1Q8NET5 270 aaPredicted RBP13.38□□□□□ -0.27
UBXN11-207ENST00000374223 TBC1D20Q96BZ9 403 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 PTCHD1Q96NR3 888 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 PHF12Q96QT6 1004 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 EGFL8Q99944 293 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 RNF32Q9H0A6 362 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 RUBCNLQ9H714 662 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 PELI2Q9HAT8 420 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 MMP25Q9NPA2 562 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 ZNF223Q9UK11 482 aaPredicted RBP13.38□□□□□ -0.27
UBXN11-207ENST00000374223 CORO1CQ9ULV4 474 aaPredicted RBP13.38□□□□□ -0.27
UBXN11-207ENST00000374223 DYRK1BQ9Y463 629 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 OARD1Q9Y530 152 aa13.38□□□□□ -0.27
UBXN11-207ENST00000374223 CACNA1CQ13936 2221 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 PDZD2O15018 2839 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 ZNF407Q9C0G0 2248 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 GABRR3A8MPY1 467 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 PRKNO60260 465 aaPredicted RBP13.37□□□□□ -0.27
UBXN11-207ENST00000374223 RASAL1O95294 804 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 ENO2P09104 434 aaPredicted RBP13.37□□□□□ -0.27
UBXN11-207ENST00000374223 EPORP19235 508 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 HSF1Q00613 529 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 EFTUD2Q15029 972 aaKnown RBP eCLIP13.37□□□□□ -0.271e-5■■■□□ 15.7
UBXN11-207ENST00000374223 HERC3Q15034 1050 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 M1APQ8TC57 530 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 ELP5Q8TE02 316 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 TRIM54Q9BYV2 358 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 RHOJQ9H4E5 214 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 LIN28AQ9H9Z2 209 aaKnown RBP13.37□□□□□ -0.27
UBXN11-207ENST00000374223 GPAMQ9HCL2 828 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 CTNNAL1Q9UBT7 734 aa13.37□□□□□ -0.27
UBXN11-207ENST00000374223 ZNF490Q9ULM2 529 aaPredicted RBP13.37□□□□□ -0.27
UBXN11-207ENST00000374223 TEP1Q99973 2627 aaKnown RBP13.36□□□□□ -0.27
UBXN11-207ENST00000374223 NCKAP5O14513 1909 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 IGKV3D-11A0A0A0MRZ8 115 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 ARHGAP10A1A4S6 786 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 CCDC188H7C350 402 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 NEURL1O76050 574 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 C1GALT1C1LP0DN25 315 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 ICAM2P13598 275 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 CD1DP15813 335 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 TPP2P29144 1249 aaPredicted RBP13.36□□□□□ -0.27
UBXN11-207ENST00000374223 AHRP35869 848 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 HSPA7P48741 367 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 AGTR2P50052 363 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 BTN3A2P78410 334 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 CBLBQ13191 982 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 SLBPQ14493 270 aaKnown RBP eCLIP13.36□□□□□ -0.27
UBXN11-207ENST00000374223 OR1C1Q15619 314 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 FAM219BQ5XKK7 198 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 SP5Q6BEB4 398 aaPredicted RBP13.36□□□□□ -0.27
UBXN11-207ENST00000374223 GALNTL5Q7Z4T8 443 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 RNF175Q8N4F7 328 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 NKAPQ8N5F7 415 aaKnown RBP13.36□□□□□ -0.27
UBXN11-207ENST00000374223 THAP3Q8WTV1 239 aaPredicted RBP13.36□□□□□ -0.27
UBXN11-207ENST00000374223 ITLN2Q8WWU7 325 aaPredicted RBP13.36□□□□□ -0.27
UBXN11-207ENST00000374223 ATL1Q8WXF7 558 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 SCMH1Q96GD3 660 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 ZNF354BQ96LW1 612 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 QRFPRQ96P65 431 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 OR1F2PQ96R84 312 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 CSF3RQ99062 836 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 ERP44Q9BS26 406 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 ABI3Q9P2A4 366 aa13.36□□□□□ -0.27
UBXN11-207ENST00000374223 C19orf25Q9UFG5 118 aaPredicted RBP13.36□□□□□ -0.27
UBXN11-207ENST00000374223 PKDREJQ9NTG1 2253 aa13.35□□□□□ -0.27
UBXN11-207ENST00000374223 TRGV8A0A0C4DH27 118 aa13.35□□□□□ -0.27
UBXN11-207ENST00000374223 TCRBV9S1A1TA0A576 114 aa13.35□□□□□ -0.27
UBXN11-207ENST00000374223 PRSS44E7EML9 344 aa13.35□□□□□ -0.27
UBXN11-207ENST00000374223 PRMT3O60678 531 aa13.35□□□□□ -0.27
UBXN11-207ENST00000374223 SH3BGRLO75368 114 aa13.35□□□□□ -0.27
UBXN11-207ENST00000374223 CCDC166P0CW27 439 aa13.35□□□□□ -0.27
UBXN11-207ENST00000374223 POU3F2P20265 443 aaPredicted RBP13.35□□□□□ -0.27
UBXN11-207ENST00000374223 RFC3P40938 356 aa13.35□□□□□ -0.27
UBXN11-207ENST00000374223 PAFAH1B1P43034 410 aa13.35□□□□□ -0.27
UBXN11-207ENST00000374223 CDKL1Q00532 357 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms