RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 RRAGCQ9HB90 399 aa16.84■□□□□ 0.29
CHUK-201ENST00000370397 CRNNQ9UBG3 495 aaPredicted RBP16.84■□□□□ 0.29
CHUK-201ENST00000370397 DNMT3LQ9UJW3 386 aa16.84■□□□□ 0.29
CHUK-201ENST00000370397 PLXNA2O75051 1894 aa16.84■□□□□ 0.29
CHUK-201ENST00000370397 K7ERQ8 282 aa16.83■□□□□ 0.29
CHUK-201ENST00000370397 PLA2G10O15496 165 aa16.83■□□□□ 0.29
CHUK-201ENST00000370397 ZNF821O75541 412 aaPredicted RBP16.83■□□□□ 0.29
CHUK-201ENST00000370397 CPSF4O95639 269 aaKnown RBP16.83■□□□□ 0.29
CHUK-201ENST00000370397 SRCP12931 536 aa16.83■□□□□ 0.29
CHUK-201ENST00000370397 IDSP22304 550 aa16.83■□□□□ 0.29
CHUK-201ENST00000370397 THPOP40225 353 aa16.83■□□□□ 0.29
CHUK-201ENST00000370397 C16orf59Q7L2K0 433 aa16.83■□□□□ 0.29
CHUK-201ENST00000370397 SYT12Q8IV01 421 aa16.83■□□□□ 0.29
CHUK-201ENST00000370397 GPR26Q8NDV2 337 aa16.83■□□□□ 0.29
CHUK-201ENST00000370397 GOT1L1Q8NHS2 421 aaPredicted RBP16.83■□□□□ 0.29
CHUK-201ENST00000370397 NDUFB11Q9NX14 153 aa16.83■□□□□ 0.29
CHUK-201ENST00000370397 REV1Q9UBZ9 1251 aa16.83■□□□□ 0.29
CHUK-201ENST00000370397 SLC22A14Q9Y267 594 aa16.83■□□□□ 0.29
CHUK-201ENST00000370397 EFCAB10A6NFE3 127 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 TPST2O60704 377 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 COX7A2P14406 83 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 CDH12P55289 794 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 P2RX3P56373 397 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 HOXC5Q00444 222 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 CSTF3Q12996 717 aaKnown RBP16.83■□□□□ 0.28
CHUK-201ENST00000370397 CTXN3Q4LDR2 81 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 ZNF385BQ569K4 471 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 OR4M1Q8NGD0 313 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.83■□□□□ 0.288e-8■■■■■ 37.2
CHUK-201ENST00000370397 SH3BP4Q9P0V3 963 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 PLEKHB1Q9UF11 243 aaPredicted RBP16.83■□□□□ 0.28
CHUK-201ENST00000370397 GPSM3Q9Y4H4 160 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 PLXND1Q9Y4D7 1925 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 ARRDC5A6NEK1 342 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 COCHO43405 550 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 SEMA7AO75326 666 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 TMEM201Q5SNT2 666 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 ERAP2Q6P179 960 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 OR8H2Q8N162 312 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 WFDC5Q8TCV5 224 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 DEPDC7Q96QD5 511 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 DUSP26Q9BV47 211 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 C11orf54Q9H0W9 315 aaPredicted RBP16.83■□□□□ 0.28
CHUK-201ENST00000370397 KCND3Q9UK17 655 aa16.83■□□□□ 0.28
CHUK-201ENST00000370397 GLYATL1P3A0A0U1RQE8 302 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 KLHL18O94889 574 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 MLLT3P42568 568 aaPredicted RBP16.82■□□□□ 0.28
CHUK-201ENST00000370397 GPR17Q13304 367 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 EFR3AQ14156 821 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 SLC35F1Q5T1Q4 408 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 KCTD5Q9NXV2 234 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 MTCL1Q9Y4B5 1905 aaKnown RBP16.82■□□□□ 0.28
CHUK-201ENST00000370397 HYKKA2RU49 373 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 SLC38A8A6NNN8 435 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 FFAR1O14842 300 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 PTX3P26022 381 aaPredicted RBP16.82■□□□□ 0.28
CHUK-201ENST00000370397 PCBP3P57721 371 aaKnown RBP16.82■□□□□ 0.28
CHUK-201ENST00000370397 GNG2P59768 71 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 MBTPS1Q14703 1052 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 TIMM50Q3ZCQ8 353 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 PARK7Q99497 189 aaKnown RBP16.82■□□□□ 0.28
CHUK-201ENST00000370397 COPS8Q99627 209 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 CNPPD1Q9BV87 410 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 NUFIP1Q9UHK0 495 aaKnown RBP16.82■□□□□ 0.28
CHUK-201ENST00000370397 STOML2Q9UJZ1 356 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.82■□□□□ 0.28
CHUK-201ENST00000370397 LGI1O95970 557 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 GASTP01350 101 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 KIR2DL3P43628 341 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 SLC11A2P49281 568 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 ZNF177Q13360 481 aaPredicted RBP16.82■□□□□ 0.28
CHUK-201ENST00000370397 ELOAQ14241 798 aaKnown RBP16.82■□□□□ 0.28
CHUK-201ENST00000370397 RNLSQ5VYX0 342 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 TSPAN33Q86UF1 283 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 CBARPQ8N350 705 aaPredicted RBP16.82■□□□□ 0.28
CHUK-201ENST00000370397 FGF11Q92914 225 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 FAM129BQ96TA1 746 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 DYRK4Q9NR20 520 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 GKN1Q9NS71 199 aa16.82■□□□□ 0.28
CHUK-201ENST00000370397 DDX28Q9NUL7 540 aaKnown RBP16.82■□□□□ 0.28
CHUK-201ENST00000370397 PRAMEF33A0A0G2JMD5 474 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 PRAMEF10O60809 474 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 CYP17A1P05093 508 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 CORO1AP31146 461 aaKnown RBP16.81■□□□□ 0.28
CHUK-201ENST00000370397 ATP5C1P36542 298 aaKnown RBP16.81■□□□□ 0.28
CHUK-201ENST00000370397 MPEG1Q2M385 716 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 FAM26DQ5JW98 314 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 LYPLAL1Q5VWZ2 237 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 SIGIRRQ6IA17 410 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 TPGS1Q6ZTW0 290 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 RFPL4BQ6ZWI9 263 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 UBE2R2Q712K3 238 aaPredicted RBP16.81■□□□□ 0.28
CHUK-201ENST00000370397 TCTE3Q8IZS6 198 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 UTP15Q8TED0 518 aaKnown RBP16.81■□□□□ 0.28
CHUK-201ENST00000370397 CREB3L4Q8TEY5 395 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 JPH3Q8WXH2 748 aaPredicted RBP16.81■□□□□ 0.28
CHUK-201ENST00000370397 SLC25A46Q96AG3 418 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 SEPT5Q99719 369 aaPredicted RBP16.81■□□□□ 0.28
CHUK-201ENST00000370397 ROGDIQ9GZN7 287 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 C1GALT1Q9NS00 363 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms