RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 ACVR1Q04771 509 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 CDH17Q12864 832 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 IFRD2Q12894 506 aaPredicted RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 IKZF1Q13422 519 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 GPR68Q15743 365 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TCEAL5Q5H9L2 206 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SPESP1Q6UW49 350 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ZNF782Q6ZMW2 699 aaPredicted RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RPS27LQ71UM5 84 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PIWIL4Q7Z3Z4 852 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TMPRSS9Q7Z410 1059 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SYT9Q86SS6 491 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PROSER1Q86XN7 944 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ADGRG3Q86Y34 549 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 P3H2Q8IVL5 708 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 FAM9CQ8IZT9 166 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 UBE2J2Q8N2K1 259 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 C9orf62Q8N4C0 152 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SPATA6LQ8N4H0 392 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PCDH19Q8TAB3 1148 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ASB15Q8WXK1 588 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 LINC01599Q8WXQ3 324 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PSMG2Q969U7 264 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TMEM169Q96HH4 297 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 HYLS1Q96M11 299 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 NSMCE2Q96MF7 247 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TMEM74Q96NL1 305 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RPRD1AQ96P16 312 aaPredicted RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 MCCC1Q96RQ3 725 aaPredicted RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 CYP2S1Q96SQ9 504 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PIP5K1AQ99755 562 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RBM4BQ9BQ04 359 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TBCDQ9BTW9 1192 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RBM4Q9BWF3 364 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TRIM54Q9BYV2 358 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ULBP1Q9BZM6 244 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SLC25A51Q9H1U9 297 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SLC6A15Q9H2J7 730 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ATP13A1Q9HD20 1204 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 MRPL17Q9NRX2 175 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 MARCH5Q9NX47 278 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 CD274Q9NZQ7 290 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TRPM5Q9NZQ8 1165 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 EMC3Q9P0I2 261 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 XPR1Q9UBH6 696 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PRELID3BQ9Y3B1 194 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 DNAH12Q6ZR08 3092 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ATRXP46100 2492 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RIF1Q5UIP0 2472 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 KMT2BQ9UMN6 2715 aaPredicted RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 KMT2EQ8IZD2 1858 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 TECTAO75443 2155 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 CACNA1HO95180 2353 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 A0A087X1B8 175 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 TRAV20A0A0B4J274 112 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 A0A1W2PQ09 198 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 DCDC2BA2VCK2 349 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 MTMR11A4FU01 709 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 LINC01553A4QN01 128 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 NEMP2A6NFY4 417 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 SLC38A8A6NNN8 435 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 GFRA2O00451 464 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 GNGT2O14610 69 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 GMDSO60547 372 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 SOCS5O75159 536 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 TULP3O75386 442 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 PMPCBO75439 489 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 ERN1O75460 977 aaKnown RBP3.84□□□□□ -1.79
CNGA1-201ENST00000358519 RFPL3O75679 317 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 RECQL5O94762 991 aaPredicted RBP3.84□□□□□ -1.79
CNGA1-201ENST00000358519 CST1P01037 141 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 FGF1P05230 155 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 RPLP0P05388 317 aaKnown RBP3.84□□□□□ -1.79
CNGA1-201ENST00000358519 USP17L7P0C7H9 530 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 SLC35E2BP0CK96 405 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 CPN2P22792 545 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 RPS3P23396 243 aaKnown RBP eCLIP3.84□□□□□ -1.79
CNGA1-201ENST00000358519 AKAP5P24588 427 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 AZGP1P25311 298 aaKnown RBP3.84□□□□□ -1.79
CNGA1-201ENST00000358519 MAOBP27338 520 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 TEAD1P28347 426 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 SOX6P35712 828 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 RPL35P42766 123 aaKnown RBP3.84□□□□□ -1.79
CNGA1-201ENST00000358519 HOXA1P49639 335 aaPredicted RBP3.84□□□□□ -1.79
CNGA1-201ENST00000358519 ATP4BP51164 291 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 AKR1D1P51857 326 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 DGKQP52824 942 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 TBX4P57082 545 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 OR4D2P58180 307 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 CXCR4P61073 352 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 AP1S1P61966 158 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 CHRNB3Q05901 458 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 SCN1BQ07699 218 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 ORC1Q13415 861 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 IL18R1Q13478 541 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 GPM6BQ13491 265 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 SIM2Q14190 667 aaPredicted RBP3.84□□□□□ -1.79
CNGA1-201ENST00000358519 GBX1Q14549 363 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 TATDN3Q17R31 274 aa3.84□□□□□ -1.79
CNGA1-201ENST00000358519 HKDC1Q2TB90 917 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms